Sphingomonas cannabina: LZK98_11080
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Entry
LZK98_11080 CDS
T08607
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scab03019
]
LZK98_11080 (rapZ)
Messenger RNA biogenesis [BR:
scab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LZK98_11080 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_33
AAA_22
AAA_16
ZSWIM1-3_C
AAA_18
Rad17
AAA_29
ABC_tran
AAA_28
T2SSE
Zeta_toxin
AAA_30
PRK
RsgA_GTPase
APS_kinase
CoaE
Motif
Other DBs
NCBI-ProteinID:
UIJ43634
LinkDB
All DBs
Position
complement(2353756..2354670)
Genome browser
AA seq
304 aa
AA seq
DB search
MNHTPKAILLVTGMSGAGKSTVLRTLEDLGWETVDNLPLRLLDRLLATALPAGEHDNRPL
AVGFGAQTRGFDGERIVQNIKRLQDTGDYEIGTLFLDCAGAELERRYSETRRRHPLATDR
PASDGIARERELLTPLRRWANRVIDTTNVGTNELQQMIRRDFGGRGLGEPVLSVMSFGYA
RGLPRNADLVFDMRFLRNPHWVEELRPGTGLDQAVADYIAGDPAYADAVPAIEDLLLLLL
PRYRAEGKSYVTIGIGCTGGRHRSVHVAERIAARLREAGFSPTVTHRDLGTAPQDSLEDR
PVPR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatacgcccaaggccatcctgctcgtcaccggcatgtccggcgccggtaagtcg
accgtgctgcgcacgctcgaggatctcggctgggaaacggtcgacaacctgccgctgcgt
ctgctcgacaggctattggccaccgccctgcctgccggcgagcacgacaaccgcccgctc
gcggtcggcttcggcgcgcagacgcggggattcgacggcgagcgcatcgtccagaacatc
aaacggctgcaggataccggcgactacgagatcggcacgctgttcctcgattgcgcaggg
gccgagctcgaacgtcgctactcggaaacgcggcgccgccatccgctcgcgaccgatcgc
ccggcaagcgacggcatcgcccgcgagcgcgagctgctcacgccactccgccgctgggcc
aaccgcgtgatcgacaccaccaacgtcggcaccaacgagctccagcagatgatccgccgc
gacttcggcggccgcggtctcggcgagccggtgctgtcggtaatgtcgttcggctatgcc
cgcgggctgccgcgcaacgccgacctcgtcttcgacatgcgcttcctgcgcaatccgcac
tgggttgaggagctgcgcccgggcaccgggctcgatcaggcggtcgcggattatatcgcc
ggcgatccggcctatgcggacgccgttccggcgatcgaggacttgctgctgctcctcctc
ccgcgctatcgggccgaggggaaatcctatgtcaccatcgggatcggctgtaccgggggg
agacatcgctcggtccatgtcgccgagcggatcgcggcaaggttgcgcgaggcgggtttt
tcgcccacggtgacccaccgcgatctcggaaccgcgccgcaggactcgcttgaagatcga
cccgtacctagatga
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