Sphingomonas cannabina: LZK98_11235
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Entry
LZK98_11235 CDS
T08607
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LZK98_11235 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scab01007
]
LZK98_11235 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scab03016
]
LZK98_11235 (aspS)
03029 Mitochondrial biogenesis [BR:
scab03029
]
LZK98_11235 (aspS)
Enzymes [BR:
scab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LZK98_11235 (aspS)
Amino acid related enzymes [BR:
scab01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LZK98_11235 (aspS)
Transfer RNA biogenesis [BR:
scab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LZK98_11235 (aspS)
Prokaryotic type
Other AARSs
LZK98_11235 (aspS)
Mitochondrial biogenesis [BR:
scab03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LZK98_11235 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
UIJ43664
LinkDB
All DBs
Position
2384615..2386441
Genome browser
AA seq
608 aa
AA seq
DB search
MHAYRTHTCGELRESHVGQEVRLSGWVHKKRDHGDLVFVDLRDHYGITQIVTEVDGPAFQ
VIESLRSESVVTITGKVTARAPEVVNPNLPTGTVEVRAAEAVVQSFAHELPMPVAGDQEY
PEDIRLRYRFLDLRRERLHANIMLRSAVIASIRRRMIEQGFTEFQTPILTASSPEGARDY
LVPSRVHPGKFYALPQAPQMFKQLLMVAGFDRYFQIAPCFRDEDARADRSPGEFYQLDFE
MSYVTQDDVFAAIEPVLHGVFEEFADWQGRGRTVSPLPFRRIPYRESMLKYGNDKPDLRN
PILITDVSAFFKGSGFSRFASMVEAGDVVRAIPAPNTAEKSRKFFDDMNAWAQSEGFPGL
GYATQKDGVFGGPIANNHGQEGMKAIAEALGLGPNDGIFFAAGKEAQAAKLAGLARTRVG
EQLELIDQSRFEFCWIVDFPMFEYDEDAKKVDFSHNPFSMPQGELEALETKDPLDILAYQ
YDIVCNGVELSSGAIRNHRPEIMYKAFEIAGYTREDVDTNFAGMINAFKYGAPPHGGSAP
GIDRIVMLLADEPNIREVIVFPMTQKAEDLMMGAPSFVTAKQLRELNIRVVEQPGAKAAT
TAELVRPE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctaccgcacgcacacctgcggcgaactccgcgagagccatgtgggacaggag
gtccgcctttcgggctgggtccacaagaagcgcgatcacggcgatctcgtcttcgtcgac
ctgcgagatcattacggcatcacgcagatcgtcaccgaggtggatggtcccgcgttccaa
gtgatcgaatcgctcaggagcgaatcggtggtgacgatcaccggcaaggtgaccgcgcgg
gcgcctgaggtggtgaatccgaacctgccgaccggaacggtcgaggtgcgggcggccgag
gcggtcgttcagtcattcgcccatgagctgccgatgccggtggcgggcgatcaggagtat
cccgaggatatccgcctccgctatcgcttccttgacctgcgccgcgagcggctgcacgcc
aacatcatgctgcgttcggcggtgatcgcgtcgatccgccgccgcatgatcgagcagggc
ttcaccgagttccagacgccgatcctgaccgcgtcgagccccgagggcgcgcgcgactat
ctcgttccgagccgggtccatccgggcaagttctacgcgctcccgcaggcgccgcagatg
ttcaagcagctgctgatggtcgcgggcttcgaccgctatttccagatcgcgccctgcttc
cgcgacgaggatgcccgcgccgaccgcagcccgggcgagttctaccagctcgacttcgag
atgagctacgtgacgcaggacgacgtgttcgccgcgatcgaaccggtgctgcacggcgtg
ttcgaggagttcgccgactggcagggcaggggccgcaccgtctcgccgctgccgttccgg
cggattccgtaccgcgaatcgatgctgaagtacggcaacgacaagccggacctccgcaac
ccgatcctgatcaccgacgtctcggcgttcttcaagggctcaggcttcagccgcttcgcc
tcgatggtcgaggcgggcgacgtcgttcgcgccatccccgcgccgaacaccgcggaaaag
agccgcaagttcttcgacgacatgaatgcctgggcgcagtccgaaggcttccccggcctc
ggctacgccacgcagaaggacggtgtgttcggcggcccgatcgccaacaaccacggccag
gaaggcatgaaggcgatcgccgaggcgctcgggctcggtcccaacgacggcatcttcttc
gctgccggcaaggaagcgcaggccgccaagctcgccggcctcgcccgcacgcgcgtcggc
gagcaactcgaactgatcgaccagagccgcttcgagttctgctggatcgtcgacttcccg
atgttcgaatatgacgaggacgcgaagaaggtcgacttcagccacaaccccttctcgatg
ccgcagggcgagctggaggcgctggagaccaaggacccgctcgatatcctggcgtaccag
tacgacatcgtctgcaacggcgtggagctgtcgtcgggcgcgatccggaaccaccggccg
gagatcatgtacaaggcgttcgagatcgccggctacacccgcgaggacgtcgacaccaac
ttcgcgggcatgatcaacgcgttcaaatacggcgcgccgccgcacggcggatcggcgccg
ggcatcgatcgcatcgtcatgctgcttgccgacgagcccaacatccgcgaggtcatcgtc
ttcccgatgacccagaaggccgaggatttgatgatgggcgcgccgagcttcgtcactgcg
aagcagctgcgcgaactcaacatccgcgtggtcgaacagccgggcgcgaaggcggcgacc
acggcagagctggtgcggccggagtag
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