Sphingomonas cannabina: LZK98_11280
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Entry
LZK98_11280 CDS
T08607
Name
(GenBank) pyruvate dehydrogenase complex E1 component subunit beta
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00010
Glycolysis / Gluconeogenesis
scab00020
Citrate cycle (TCA cycle)
scab00620
Pyruvate metabolism
scab00785
Lipoic acid metabolism
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01120
Microbial metabolism in diverse environments
scab01200
Carbon metabolism
scab01210
2-Oxocarboxylic acid metabolism
Module
scab_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LZK98_11280
00020 Citrate cycle (TCA cycle)
LZK98_11280
00620 Pyruvate metabolism
LZK98_11280
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LZK98_11280
Enzymes [BR:
scab01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
LZK98_11280
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
Biotin_lipoyl_2
PFOR_II
QRPTase_N
RnfC_N
HlyD_3
NQRA_N
Transketolase_C_1
ATP-synt_ab_Xtn
Ser_hydrolase
Motif
Other DBs
NCBI-ProteinID:
UIJ43673
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All DBs
Position
2391486..2392883
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AA seq
465 aa
AA seq
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MAIELKMPALSPTMEEGTIAKWLVKEGDTVKSGDILAEIETDKATMEFEAVDEGTVAKIL
VPEGTDGVKVGTVIATIAGEGEDASATPAPTPAPAEKAAPVPAPEGGEQKPVETGARAMF
EAAKRDAASDPEVPEGTEMVKQTIREALRDAMAEEMRADPRVFVMGEEVAEYQGAYKVTQ
GLLDEFGPKRVIDTPITEYGFAGLGTGAAMGGLKPIVEFMTFNFAMQAIDHIVNSAAKTN
YMSGGQMRCPIVFRGPNGAASRVAAQHSQNYGPWYASVPGLIVIAPYDAADAKGLLRAAI
QTDDPVVFLENELLYGRTFEVPKLDDWVLPIGKARIMRPGKDVTIVSYSIGVGVSLEAAE
MLEKEGIEAEVVDLRTLRPLDKATVLKSLAKTNRLVVVEEGWPTCSISSEIMAIAMEEGF
DDLDAPVLRVTNEDVPLPYAANLEKLALITADKVVAAVKKVTYKG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgagctcaagatgccggcgctctccccgacgatggaggagggcaccatcgcc
aaatggctggtgaaggaaggcgacacggtgaagtcgggcgacattctcgccgagatcgag
accgacaaggcgacgatggagttcgaggcggtcgacgaaggcaccgtcgccaagattctc
gtgcctgagggcaccgatggggtgaaggtcggcaccgtgatcgcgacgatcgcgggcgag
ggcgaggatgcctctgcgacccccgcgccgactccggctccggccgagaaggcagcgccg
gtgccggcgcccgagggcggcgagcagaagccggtcgagaccggcgcccgcgccatgttc
gaggcggcgaagcgcgacgcggccagcgaccccgaggtccccgagggcaccgagatggtc
aagcagaccatccgcgaggctctgcgcgacgccatggccgaagagatgcgtgcggatccg
cgcgtgttcgtgatgggcgaggaggtcgccgagtatcagggcgcctacaaggtcacccag
gggctgctcgacgagttcgggccgaagcgcgtgatcgacacgccgatcaccgagtacggc
ttcgccggcctcggcaccggcgcggcgatgggcgggttgaagccgatcgtcgagttcatg
accttcaacttcgcgatgcaggcgatcgaccacatcgtgaactcggcggccaagaccaac
tacatgtccggcggccagatgcgctgcccgatcgtgttccgcggccccaatggcgccgcc
agccgcgtcgccgcgcagcactcgcagaactacgggccctggtacgccagcgtccccggc
ctgatcgtgatcgcgccctatgacgcggcggacgccaagggcctgctgcgcgccgcgatc
cagaccgacgaccccgtcgtgttcctcgagaacgagctgctctacggccgcaccttcgag
gtgccgaagctcgacgactgggtgctgccgatcggcaaggcgcgcatcatgcggccgggc
aaggacgtcaccatcgtcagctactcgatcggggtgggcgtgagcctggaagccgccgag
atgctggagaaggaaggcatcgaggccgaggtggtcgacctcaggacgctgcgcccgctc
gacaaggcgacggtgctgaagtcgctcgccaagaccaaccgcctggtggtggtcgaggag
ggctggccgacctgctcgatctcgtcggagatcatggcgatcgcgatggaggagggcttc
gatgaccttgacgccccggtgctgcgcgtcaccaacgaggacgtgccgctgccctatgcc
gccaacctcgagaagctggcgctgatcaccgccgacaaggtggtcgcggcggtgaagaag
gtgacgtacaaaggctga
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