Sphingomonas cannabina: LZK98_11355
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Entry
LZK98_11355 CDS
T08607
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scab03032
]
LZK98_11355 (gyrA)
03400 DNA repair and recombination proteins [BR:
scab03400
]
LZK98_11355 (gyrA)
Enzymes [BR:
scab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LZK98_11355 (gyrA)
DNA replication proteins [BR:
scab03032
]
Prokaryotic type
DNA Topoisomerases
LZK98_11355 (gyrA)
DNA repair and recombination proteins [BR:
scab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LZK98_11355 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2835
Motif
Other DBs
NCBI-ProteinID:
UIJ43687
LinkDB
All DBs
Position
complement(2402003..2404753)
Genome browser
AA seq
916 aa
AA seq
DB search
MTDETLLADPSDITPISIVDEMKSSYLDYAMSVIVARALPDVRDGLKPVHRRILWSCQES
GYVWNRSYRKCARITGDTMGKYHPHGNQAIYDALARLAQDWAMRVPLIDGQGNFGSMDPD
PPAAERYTEARLAKVAGSLLEDIEKDTVDFVPNYDGSEREPSVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVIDACLAYMDNGAITTEELMEIVPGPDFPTGALILGRSGCRAAYEG
GRGSIIVRSRHSFEQRGDRRSIVLTEIPYQQGKNALVEKIAEAAKDKRVEGVSDIRDESN
REGVRIVIDLRRDATPEVVLNQLWRHTPAQGSFPANMLAIRGGRPELLNLRDIIEAFVRF
REEVITRRSKFELAKARERAHLLLGLVIAVTNLDEVVRIIRGSPNPATARETLLAREWPV
AEIAPYIRLVEAVEAEVEGDSYRLSELQVRAILDLRLHRLTALGRDEIGDELAELASSIA
EFLEILANRAKLYEIMRAELIEVRDQFATPRRTEIAAAADGIEDEDLIEREDMVVTVTME
GYIKRTPLDTFRAQNRGGKGRAGMATKDEDVVTELFVTSTHTPVLFFSTLGRVYRMKVWR
LPEGGANTRGRPMINLLPLANGETISTVLPLPEDENEWGKLHVMFATARGSVRRNSMDAF
TNVPSNGKIAMKFEGEDEDDRLIGVALLDENDDVLLATRQGKAIRFPGSDVREFQSRNST
GVRGMTLKDGDEVISLSILHRSGATSEEREDYLRYAPWKAERDGEPSMPLDRFEHLRAHE
QFILTICANGYGKLSSAYEYRRTGRGGQGITNIDNIARNGPVVASFPATKAQQLMLVTDQ
AKLIRIPLGDLRVIGRGSAGVRLFNVADDEHVVSAARIEESEEAAEANLGDGPSVGAPTP
DAEPGEDLAAGPEDGE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacgagacgctgctcgccgacccctccgacattacccccatctcgatcgtcgac
gagatgaagtcgagctatctcgactatgccatgtccgtgatcgtcgcgcgcgcgctgccc
gacgtgcgcgacgggctgaagccggtccaccgccgcatcctgtggtcgtgccaggaaagc
ggctacgtctggaaccgttcctatcgcaagtgcgcccgcatcaccggcgacacgatgggt
aagtaccacccgcacggcaaccaggcgatctacgacgcgctcgcgcgtctcgcccaggac
tgggcgatgcgggtgccgctgatcgacggccagggcaatttcgggtcgatggaccctgat
ccgcccgcggccgagcgttacaccgaagcgcgtctggccaaggtcgcgggttcgctgctc
gaggacatcgaaaaggacacggtcgacttcgtccccaattacgacgggtcggaacgcgag
ccttcggtcctccctgcgcgcttccccaatctcctcgtcaacggcgccggcggcatcgcg
gtcggcatggcgaccaacatcccgccgcacaatctgggcgaggtgatcgacgcgtgcctt
gcgtacatggacaacggcgcgatcacgaccgaagaactgatggagatcgtaccgggaccg
gacttcccgaccggcgcgctgatcctcggccgttcgggctgccgcgcggcctatgagggc
gggcgcggctcgatcatcgtgcgctcgcgccacagcttcgagcagcgcggcgaccgccgc
tcgatcgtgctcaccgaaatcccctaccagcagggcaagaacgcgctggtcgagaagatc
gccgaggctgccaaggacaagcgcgtcgaaggcgtcagcgacatccgggacgaatcgaac
cgcgagggcgtgcgcatcgtcatcgacctgcgccgcgacgcgacgcccgaggtggtgctg
aaccagctgtggcgccacacgccggcgcagggcagcttcccggccaacatgctcgcgatc
cgcggcggccggcccgagctgctcaacctgcgcgacatcatcgaggcgttcgtccgcttc
cgcgaggaggtgatcacccgccgctcgaagttcgagctcgccaaggcccgcgagcgcgct
cacctgttgctcggcctcgtcatcgcggtcaccaacctcgacgaggtggtgcgcatcatc
cgcggatcgccgaatccggcgacggcgcgtgagaccctgctcgcccgcgaatggccggtc
gccgagatcgcgccctatatccgcctggtcgaggcggtcgaggccgaggtggaaggcgac
agctaccgcctgtccgagctccaggtccgcgcgatcctcgacctgcgcctccaccgcctg
accgcgctcggccgcgacgagatcggcgacgagctggcggagctggccagctcgatcgcc
gaattcctcgagatcctcgccaaccgcgccaagctctacgagatcatgcgcgccgagctg
atcgaggtgcgcgaccagttcgccacgccgcgccggaccgagatcgccgccgccgccgac
ggcatcgaggacgaggacctgatcgagcgcgaggacatggtcgtcaccgtgaccatggaa
ggctatatcaagcgcaccccgctcgacaccttccgcgcccagaaccgcggcggcaagggc
cgcgccggcatggcgaccaaggacgaggacgtcgtcaccgagctgttcgtgacctccacg
cacacgccggtgctgttcttctccacgctcggccgcgtctatcgcatgaaggtgtggcgc
ctgccggaaggcggcgccaacacgcgcgggcggccgatgatcaacctgctgccgctcgcc
aatggcgagacgatctcgaccgtgctgccgctgcccgaggacgagaacgagtggggcaag
ctccacgtcatgttcgcgaccgccaggggctcggtgcgccgcaactcgatggacgcgttc
accaacgtgccgtcgaacggtaagatcgcgatgaagttcgagggcgaggatgaggacgac
cgactgatcggcgtcgcgctgctcgacgagaacgacgacgtcctgctggcgacgcgccag
ggcaaggcgatccgcttccccggcagcgacgtgcgcgagttccagagccgcaactcgacc
ggcgttcgcggcatgacgctgaaggatggcgacgaggtgatctcgctgtcgatcctccat
cgttcgggcgcgacctcggaggagcgcgaggactatctccgctacgcgccgtggaaggcg
gaacgcgacggcgagcccagcatgccgctcgaccggttcgagcatctgcgcgcgcacgag
cagttcatcctgaccatctgcgccaacggctatggcaagctgtcctccgcctatgagtat
cgccgcaccggccgcggcggccagggcatcaccaacatcgacaacatcgcccgcaacggc
cccgtcgtcgctagctttccggcgaccaaggcgcagcagctcatgctggtcaccgaccag
gccaagctgatccgcatcccgctcggcgatctccgcgtcatcggcaggggctcggcgggc
gtgcggctgttcaacgtcgccgacgacgagcatgtcgtctccgccgcgcgcatcgaggag
agcgaggaggccgccgaagcgaacctcggcgacggtccgagcgttggggcaccgacaccc
gatgccgaaccgggcgaggacctggcggcaggtccggaggacggcgagtga
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