Sphingomonas cannabina: LZK98_12010
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Entry
LZK98_12010 CDS
T08607
Name
(GenBank) sensor histidine kinase KdpD
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
scab
Sphingomonas cannabina
Pathway
scab02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LZK98_12010
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scab01001
]
LZK98_12010
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
scab02022
]
LZK98_12010
Enzymes [BR:
scab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LZK98_12010
Protein kinases [BR:
scab01001
]
Histidine kinases
OmpR family
LZK98_12010
Two-component system [BR:
scab02022
]
OmpR family
KdpD-KdpE (potassium transport)
LZK98_12010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
DUF4118
HATPase_c
HisKA
GAF_3
HATPase_c_2
Thia_YuaJ
Motif
Other DBs
NCBI-ProteinID:
UIJ43816
LinkDB
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Position
2499322..2502003
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AA seq
893 aa
AA seq
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MASNDTRPSPDALLRAAEREERGKLKIFLGAAPGVGKTFEMLREGAERKKAGADVVIAVV
ETHGRAETAALLEPFEVIPRRAIDYQGHKLEEMDLDAVLARQPELALVDEFAHTNVEGSR
HPKRWQDVAELLDAGIDVYTTLNIQHVESLNDVVASFTKVRVRETVPDSVFEGAEIEVVD
LPPDELIERLKEGKVYIPAEASRALGHFFSKANLSALREMALRRAALTVDRALLEDLDAS
ALPGTYAGGERVLVAVSELPGSDTMVRAAKRMADALRAPWQAVYIETPRAESFDEAAKHR
VADTLRLAASLGATIATVPAASVIEGLSRHIQGMRATQLVIGKSVRSWWFELRHGSVVNA
MLRESDGLAVHVIPAQTAAPKPGTVRQKGKWGRGPNHLVIVGMIVATTLLARLAEPLIGV
GGIDLLYLLPVLFASGRYGLRPGLIAGVLAGLAYNFFFLPPLYTLTIADPQSVLTMFVLI
GIGAFTANLAGRLKSRATLGARSAQENAAVAAFGQALARTSDWETTSRITCEEIARLLEV
DVVLLNQRDGTLVPVASAPEVGSLGPVNQAAAEWTWSRGEPAGAGTATLNAADWQFHPLK
TALGVLAVIGLSREDGRDPVSADRAVLLSTLLGQAALAHERLKLEDQVREVSVLKERDRL
RAALLSSIGHDLRTPLTTVAGSVEAIAAEHPDDPNVPLAKAEIARLRRFLDNLLDMVRID
AGALKLAPEPTDLTDAVGGAVHDLKDLLRGRHIDLKVPANLPFVTADPTLLHHILINLLA
NAAVHGGDDGTIVIEGRRTPDAVLLSVRDRGPGLQAGSEARVFETFAQGRGSDRHGGSGL
GLAIVKGFADAMAIDVNASNDPDGGAVFTLRFTRIAPAGETGAASTLPEEDPE
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaacgatacccgtccgtcccccgacgcgctgcttcgcgccgccgagcgcgag
gagcggggcaagctcaagatcttccttggtgccgcgccgggcgtcggcaagaccttcgag
atgctgcgcgagggcgccgaacggaagaaggctggagccgacgtggtcatcgccgtggtc
gagactcacggccgcgccgagaccgcggcgctgctcgagccgttcgaggtgatcccgcgc
cgggcgatcgactatcagggtcacaagctcgaggagatggacctcgacgcggtgctcgcc
cgccagcctgagctcgcgctggtcgacgagttcgcgcacaccaatgtcgagggcagccgg
caccccaagcgctggcaggacgtcgccgagctgctcgatgccggcatcgacgtctatacg
acgctcaacatccagcacgtcgaaagcctcaacgacgtcgtcgcgagcttcaccaaggtg
cgcgtgcgcgagacggtgcccgacagcgtgttcgagggtgccgagatcgaggtggtcgac
ctgccgccggacgagctgatcgagcggctgaaggagggcaaggtctatatcccggccgag
gcgagccgcgcgctcggccatttcttttccaaggcgaacctgtcggcgctgcgagagatg
gcgctccgccgcgccgcattgaccgtcgatcgggcattgctggaggatctcgacgcgagc
gcgctgcccggcacctatgccggtggcgagcgcgtgctggtggcggtgagcgagctgccg
ggctccgatacgatggtgcgtgccgccaagcggatggccgatgcgctgcgggcgccgtgg
caggcggtctatatcgagacgccccgcgccgagagcttcgacgaggccgccaaacaccgt
gtcgccgacacgctgcggctcgccgccagcctgggtgcaacgatcgcgacggtgccggcg
gcgagcgtgatcgagggcctttcccgtcacatccagggcatgcgcgcgacccagctcgtg
atcggcaagtcggtccggagctggtggttcgagctgcgtcacggatcggtcgtgaacgcg
atgctgcgggagagcgacgggctcgcggtccacgtcattcccgcgcagacagctgcgccg
aagcccggcaccgtgcgacagaaggggaaatggggccggggccccaaccacttggtcatc
gtcgggatgatcgtggcgacgaccctgcttgcccggctcgccgagccgctgatcggcgtc
ggggggatcgacctcctctacctgctgccggtgctgttcgcctcgggccgctacggcttg
cgaccaggcctgatcgcgggggtgctggcgggcctcgcctataatttcttcttcctgccg
ccgctctacacgctgaccatcgccgacccgcagagcgtgctgacgatgttcgtgctgatc
ggcatcggcgccttcaccgccaatctcgccggccggttgaaatcgcgcgcgactctggga
gcacggagcgcgcaggagaatgccgcggtcgccgccttcgggcaggcgctcgcgcgaacc
tcggactgggagacgaccagccgcatcacctgcgaggagatcgcgcggctgctcgaggtc
gacgtcgtgctgctcaatcagcgcgatggaacgctggtgccggtggcgagcgcgcccgag
gtcggctcgcttgggccggtcaaccaggccgccgcggaatggacctggagccgtggcgag
cctgccggggcagggacggccacgctcaatgccgccgactggcagtttcatccgctcaag
accgcgctcggggtactcgcggtgatcggcctgtcgcgcgaggatggccgcgatccggtg
tcggccgaccgcgcggtgttgctgtcgacgctgctcggccaggcggcgctggcgcatgag
cgcttgaagctggaggaccaagtgcgcgaggtgagcgtcctcaaggagcgcgaccggctg
cgcgcggcgctgctctcgtcgatcggccatgacctgcgcacgccgctgacgacggttgcc
ggatcggtggaggcgatcgcggccgagcatccggatgatcccaacgtgccgctggccaag
gcggagatcgcacggctgaggcgcttcctcgacaatttgctcgacatggtgcggatcgat
gccggggcgctcaagctcgcgccggagccgaccgatctcaccgacgcggtgggcggggcg
gtgcacgacctcaaggacctgctgcgcggccggcatatcgacctcaaggtgcccgccaac
ctgccgttcgtgacggcggatccgaccttgctccaccacatcctcatcaacctgctcgcc
aatgccgcagtgcatggcggtgacgacgggacgatcgtgatcgaaggacggcggacgccc
gatgcggtgctgctgtcggtgcgcgatcgtgggccggggcttcaggccggcagcgaggcc
cgtgtgttcgagaccttcgcccagggccgcggcagcgaccgccacggcggcagcgggctc
ggcctcgccatcgtcaagggcttcgccgacgcgatggcgatcgatgtgaacgccagcaac
gatcccgacggtggcgcggtgttcaccctgcgtttcacccggatcgccccggcgggcgag
accggtgccgcttcgacgctgccggaagaagaccccgaatga
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