Sphingomonas cannabina: LZK98_12080
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Entry
LZK98_12080 CDS
T08607
Name
(GenBank) response regulator
KO
K13587
two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:
2.7.13.3
]
Organism
scab
Sphingomonas cannabina
Pathway
scab02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LZK98_12080
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scab01001
]
LZK98_12080
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
scab02022
]
LZK98_12080
Enzymes [BR:
scab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LZK98_12080
Protein kinases [BR:
scab01001
]
Histidine kinases
Cell cycle family [OT]
LZK98_12080
Two-component system [BR:
scab02022
]
Cell cycle family
CckA-CtrA/CpdR (cell cycle control)
LZK98_12080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
PAS_4
PAS_8
PAS
HisKA
Motif
Other DBs
NCBI-ProteinID:
UIJ43830
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Position
2514661..2517057
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AA seq
798 aa
AA seq
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MATLPHSSGQPQHPSVALPLVVAVGAAALAAAAILLLIGDRTLAIGFGAAGLIVGAAAFA
ASRLIHAATAVSTEPDWGVAHAIAATSAEAVAVTDRAGRIVCANDRYETLFGGYPTPPNV
PLPEDEVGRLGTAGRAAWREGEGRTALIVRDERVEVTVGRIGDEMLLWRFKMADAVNVVA
IATAAIAGPNGDRLGGAGIMAALLGPDGRVRTANRVLRARAMGHEEGAIEGRDFARFLIT
DSAGLVRFEREGLGGNPLRVLQVPFLDGDDAPMLVVLLDEEPQITVPAIGSSAASHVRSL
IALLPVPLALIDREGRFLHMNEAFTRVTGVNGSAPPLYPGDLVVRDDKAALADAIRRFAG
GAAHSTQMPVRFADRPDEPVQVGLAGARGLGEAAVLMSVKDDAEEGKLKDQVAQATKMQA
VGQLAGGVAHDFNNILTAIIGHCDLMLMRHTPGDSDYDDIQQIRMNSNRAAGLTRQLLAF
SRQQTLRPQVLQLPDVISEVSNLLKRLLGETVRLVVNHGRNLGPVRIDPGQLEQVVINLA
VNARDAMLAKNPNGGGTLTIETMAVGPSEVRGMEDDVLPVGDYTALRVSDTGTGIPADVL
PKIFEPFFTTKEVGKGTGLGLSTVYGIVKQSGGYIFAESPRSGGAAFTIYLPVHSAAAAP
APAPASSSKAKPGDTWGSGTILLVEDEDMVRAVAERALTRQGYQVVTAENGEAALELLAQ
MESAPDLLISDVVMPTMDGPTMVRRARERYPNLAILFMSGYAEEQLRRSIDIDRVAFLPK
PFSVQQLAEAARDVLAAK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggccacgcttccgcactcgtcaggacaaccccaacatccctccgtcgcgctaccgctg
gtcgtcgcggtcggcgcggcggccttggcggcggcagcgatcctgttgctgatcggtgac
cgcacgctggcgatcggattcggcgcggcgggcctgatcgtcggcgctgccgccttcgcg
gcgtcgcggctgatccatgccgcgaccgccgtctcgaccgagccggactggggcgtcgcc
cacgcgatcgccgcgacctcggcggaggcggtcgcggtcaccgaccgggctgggcgcatc
gtctgcgccaacgatcgctacgagacgctgttcggcggctatccgaccccgcccaacgtg
ccgctgcccgaagacgaggtcggccggctcggcaccgccggccgtgccgcctggcgggaa
ggggagggacggaccgcgctgatcgtgcgcgacgagcgcgtcgaggtgaccgtcggccgg
atcggcgacgagatgctgctgtggcgcttcaagatggccgatgccgtcaacgtcgtcgcg
atcgcgacggcggccattgccgggcccaacggcgaccggcttggcggcgcggggatcatg
gcggccttgctcgggccggacgggcgggtgcgtaccgccaatcgcgtgctccgcgcccgt
gcgatggggcatgaggagggcgcgatcgagggccgcgacttcgcgcgtttcctcatcacc
gacagcgccgggctggtccgtttcgagcgcgaagggctgggtggcaacccgctgcgcgtg
ctgcaggtgccgttcctcgacggcgacgacgcgccgatgctggtggtcctgctcgacgag
gagccgcagatcacggtgcccgcgatcggatcgagcgcggcgagccacgtccgcagcctc
atcgcgctgctgccggtgccgctggcgctgatcgatcgcgagggccggttcctgcacatg
aacgaggccttcacccgcgtgaccggcgtcaacgggtcggcgccgccactctatccgggc
gacctggtcgtgcgcgacgacaaggcggcgctggccgacgcgatccgccgcttcgccggc
ggcgcggcgcattcgacgcagatgccggtgcgcttcgccgatcggcccgacgagccggtg
caggtcggcctcgccggcgcgcgcgggctcggcgaggcggcggtgctgatgagcgtcaag
gacgatgccgaggaaggcaagctcaaggaccaggtcgcgcaggcgaccaagatgcaggcg
gtcggccagctcgccggcggcgtcgcgcacgacttcaacaacatcctgaccgcgatcatc
ggccactgcgacctgatgctgatgcgccatacgccgggcgacagcgactatgacgacatc
cagcagatcaggatgaactcgaaccgcgcggccgggctgacgcgccagctgctcgccttc
tcgcgccagcagacgctcaggccgcaggtgctgcagcttcccgacgtgatctcggaggta
tcgaacctcctgaagcgcctgctcggcgagacggtgcggctggtcgtcaaccacggacgc
aacctggggccggtgcggatcgatccgggccagctcgagcaggtggtgatcaacctcgcc
gtcaatgcccgcgatgcgatgctcgccaagaaccccaacggcggcggcacgctgacgatc
gagacgatggcggtcggtccgtccgaggtgcgtggcatggaggacgacgtgcttccggtc
ggcgattatacggcgctccgcgtctccgacaccggcaccggcattccggccgacgtgctg
cccaagatcttcgagccgttcttcaccacgaaggaggtggggaaggggaccgggctcggg
ctttcgaccgtctatggcatcgtcaagcagtcgggcggctatatcttcgccgagagcccg
cgcagcggcggcgcggcgttcaccatctatctgccggtccattcggcggccgccgcgccg
gctcccgcaccggcgtcgtcgtcgaaagcgaagccgggcgatacctggggcagcggcacc
attctcctcgtcgaggacgaggacatggtgcgcgcggtggcggagcgggcgttgacgcgg
cagggctatcaggtggtcactgccgagaatggcgaagcggccctggagctgcttgcgcag
atggagagcgcgcccgacctgctgatctccgacgtcgtcatgccgacgatggacggcccg
acgatggtgcggcgcgcccgcgagcgttatcccaacctcgcgatcctgttcatgtccgga
tatgccgaggagcagttgcgtcgctcgatcgacatcgaccgcgtcgctttcctgccgaaa
cccttttcggttcagcagcttgccgaggccgcgcgcgacgtgctggccgcgaagtga
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