Sphingomonas cannabina: LZK98_12690
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Entry
LZK98_12690 CDS
T08607
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00071
Fatty acid degradation
scab00362
Benzoate degradation
scab00650
Butanoate metabolism
scab01100
Metabolic pathways
scab01120
Microbial metabolism in diverse environments
scab01200
Carbon metabolism
scab01212
Fatty acid metabolism
Module
scab_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LZK98_12690
09103 Lipid metabolism
00071 Fatty acid degradation
LZK98_12690
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LZK98_12690
Enzymes [BR:
scab01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LZK98_12690
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
Pyr_redox_2
ApbA
Pyr_redox
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
UIJ43941
LinkDB
All DBs
Position
2638373..2640415
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AA seq
680 aa
AA seq
DB search
MSTTLAATPVRTERHDDVLVIISDNPPVNALGAGVRQGLDAGIKEAAADPAIKAVVIRCD
GRTFFAGADITEFGKPPVEPWLPAVVDAIEALDKPVVAAIHGTAFGGGCEVALGCHYRIA
VPSAKLGTPEVKLGLLPGAGGTQRIPRIAGVKLALEMTALGDPISAERALDAGLIDRLAG
EDSLEPDAVTFAREVADWRPLPRASEKSVTPDPEAVEAFRQANARRFRGFEAPFANIACV
EKAASGASFADGIAFERQEFMKLMMGTQSAAQRHIFFAERKASKIDDVPEDTKLRDIRKV
GVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGTATIRKNYEATAAKGRITAAQVEK
AMGLLTPTLDFDALANCDLVIEAVYESMDVKKEVFGKLDHVAKPGAILASNTSYLNIDEI
AAAISRPEDVLGMHFFSPANVMKLLEVVRGAKTAPDVLATVMALAKTIRKVAVVAGVCFG
FIGNRMLMPRQIEANKLLMEGASPEQIDKVHVEFGMPMGPFQMSDLAGVDIGWHRDPTRI
ESIRDALCAEGRWGQKKGAGFYDYDEKRNPTPSPRVAEIIEEFRKKTGTPQHAVTDEEIV
ERTLYPMVNEGAKILAEGMAQRASDIDVVWIYGYGWPVYRGGPMFWANTVGLKAIVDGLE
KHGFDVAPLLREKAEKGERF
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaccttggccgctacccccgtccgcaccgaacgccacgacgacgtcctcgtc
atcatctccgacaacccgccggtgaacgcgctcggcgccggggtgcgccagggattggac
gccggcatcaaggaagccgccgccgatccggcgatcaaggcggtagtgatccgctgcgac
ggccgcactttcttcgccggcgccgacatcaccgagttcggcaagcccccggtcgagccc
tggctgcccgccgtggtcgacgcgatcgaggcgctcgacaagccggtggtggcggcgatc
cacggcaccgcgttcggcggcggctgcgaggtggcgctcggttgccattaccgcatcgcc
gtgccctcggcgaagctcggcacgcccgaggtcaagctcggcctgctccccggcgcgggc
ggcacccagcgcattccgcgtatcgccggcgtcaagctggcgctggagatgaccgcgctc
ggcgacccgatctccgccgaacgggcactcgacgcaggtctcatcgaccgcctcgccggc
gaggacagcctggagcccgatgcggtcaccttcgcccgcgaagtcgccgactggcgcccc
ctgccccgcgcctcggaaaagagcgtgacgcccgatcccgaggcggtcgaggcattcaga
caagccaacgcccgccgcttccgcggcttcgaggcgccgttcgccaacatcgcctgcgtc
gagaaggcggcgtccggcgcgagcttcgccgacggcatcgccttcgagcggcaggaattc
atgaagctgatgatgggcacccaatcggccgcccagcgccatatcttcttcgccgagcgc
aaggcctcgaagatcgacgacgtgcccgaggacaccaagctgcgcgacatccgcaaggtc
ggcgtgatcggcgccggcacgatgggcggcggcatcagcatgaacttcctgtccgccggc
atcccggtgacgatcgtcgagatggcgcaggaggcgctcgatcgcggcacggccacgatc
cgcaagaactacgaggccacggccgccaagggccgcatcaccgccgcgcaggtcgaaaag
gcgatgggcctgctcactcccacgctcgacttcgacgccctcgccaactgcgacctcgtc
atcgaggcggtctatgagagcatggacgtcaagaaggaggtgttcggcaagctcgatcat
gtagccaagcccggtgcgatcctcgcctccaacaccagctacctcaacatcgacgagatc
gccgcggccatctcacggcctgaggatgtgctggggatgcacttcttctcgcccgccaac
gtgatgaagctgctcgaggtcgtgcgcggggcgaaaaccgcacccgacgtgctggcgacg
gtgatggcgctcgccaagacgatccgcaaggtcgcggtggtcgccggcgtctgcttcggc
ttcatcggcaaccgcatgctgatgccgcgtcagatcgaggccaacaagctcctgatggag
ggcgccagccccgagcagatcgacaaggtccatgtcgagttcggcatgccgatgggcccc
ttccagatgagcgacctcgccggcgtcgacatcggctggcaccgcgacccgacccgcatc
gaaagcatccgcgacgcgctctgcgccgagggccgctggggccagaagaagggcgcgggc
ttctacgactatgacgagaagcgcaatccgacgccgtccccgcgcgtcgccgagatcatc
gaggagttccgcaagaagaccggcacgccccaacacgcggtgaccgacgaggagatcgtc
gagcgcacgctctacccgatggtcaacgagggcgcgaagatccttgccgaagggatggcc
cagcgcgcgtcggacatcgatgtggtgtggatctacggctacggctggccggtctatcgc
ggcgggccgatgttctgggcgaacacggtggggctcaaggcgatcgtcgacgggctggag
aagcacggcttcgacgtggccccgctgctgcgcgagaaggcggagaagggggaacggttc
tga
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