Sphingomonas cannabina: LZK98_12745
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Entry
LZK98_12745 CDS
T08607
Name
(GenBank) TetR/AcrR family transcriptional regulator
Organism
scab
Sphingomonas cannabina
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_24
TetR_C_7
HTH_31
HTH_24
TetR_C_9
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UIJ43952
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Position
2651043..2652284
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AA seq
413 aa
AA seq
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MNAPDPIRAAEEGGTKRFRAKRDAILAAAAEAINEQSAKGMTFADVAARVGLNTTSVTYY
FRRKEDLATACFEHTLERLQDMLAASMAEPTPERRVAKFLEINMTRLAAIRREEEKPLAV
LSDLRALEGPAREQLLAGWREVFSRTRLLWGEPATRAIKDLNGARAHVLLENSFWLSAWL
TRYELDEYPRVEQRIMDVFRTGLARQDAAWAPALLDLTHDESEPGRAAFLTAATRLINEL
GYRGASVHRIASELNVTKGSFYHHLDAKDELVTACYKRSFDTIADAQRLAHERGGSLWQM
LQDVIATLLDVQFSEHGPLLRTTALSGLPPRERQTMIDRSNRIARRFAGMISDGIAEGSI
RPVDPLVASQLLMSLQNAAFDMRKWAGTMSRERAVAMYASTLAFGLFDDRAAG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccccggacccgatccgcgcggccgaggaggggggaacgaagcggttccgcgcg
aagcgtgacgccatcctcgccgcagccgccgaagccatcaacgaacagagcgcgaagggc
atgaccttcgccgacgtcgccgcgcgcgtcgggctcaacaccaccagcgtcacctattat
ttccgccgcaaggaggacctcgccaccgcctgcttcgagcatacgctcgagcggctgcag
gacatgctggcagcctcgatggcggaaccgacgccggagcggcgcgtcgccaaattcctc
gagatcaacatgacccgcctcgccgcgatccgccgcgaggaggagaagccgctggcggtg
ctgtcggacctgcgcgcgctggaggggccggcgcgcgagcagctcctcgccggctggcgc
gaggtgttcagccgcacccgcctgctgtggggcgagccggcgacccgcgcgatcaaggac
ctcaacggcgcccgcgcgcacgtgctgctcgagaacagcttctggctgtcggcctggctc
acccgctacgaactcgacgaatatccgcgcgtcgagcagcgtatcatggacgtgttccgc
accggcctcgcccgccaggacgcggcctgggcgccggcgctgctcgacctgacgcacgac
gaaagcgagcccggccgcgccgccttcctgaccgcggcgacgcgcctcatcaacgagctc
ggctaccgcggcgcctcggtgcacaggatcgcgagcgagctcaacgtcaccaagggcagc
ttctaccaccatctcgacgccaaggacgagctggtcaccgcctgctacaagcgcagcttc
gacaccatcgccgacgcccagcgcctcgcgcacgagcgcggcggcagcttgtggcagatg
ctgcaggacgtgatcgcgacgttgctcgacgtgcagttctcggagcacggcccgctcctg
cgcaccaccgcgctgtcgggcctgccgccgcgcgagcggcagacgatgatcgaccgctcg
aaccgcatcgcgcgccgcttcgccggcatgatctccgacggcatcgccgagggctcgatc
cgcccggtcgacccgctggtcgcgagccagctgctgatgtcgctgcagaacgccgccttc
gacatgcgcaaatgggccggcaccatgagccgcgagcgcgcggtggcgatgtacgcatcg
acgctggcattcggcctgttcgacgacagggcggcggggtag
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