Sphingomonas cannabina: LZK98_12840
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Entry
LZK98_12840 CDS
T08607
Symbol
trpA
Name
(GenBank) tryptophan synthase subunit alpha
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00260
Glycine, serine and threonine metabolism
scab00400
Phenylalanine, tyrosine and tryptophan biosynthesis
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01230
Biosynthesis of amino acids
Module
scab_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LZK98_12840 (trpA)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
LZK98_12840 (trpA)
Enzymes [BR:
scab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
LZK98_12840 (trpA)
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Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
Amidohydro_2
Motif
Other DBs
NCBI-ProteinID:
UIJ43968
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Position
2669786..2670607
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AA seq
273 aa
AA seq
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MTLSHGAATRLSAAFAKGCPALVTFVTAGDPSPAATPAILDALVEGGADVIELGMPFTDP
MADGPAIQAANLRSLAAGTTTADILALAKGFRERHPDTPLVLMGYANPMLRRGAEWFADA
CAAAGVDGVICVDVPPEEDDALGPALRAKDVALIRLATPTTDAARLPAVLGDAGGFLYYV
SVAGITGLQQAAQASIAEAVGRLKSATDLPVAVGFGIRTPEQAAAVAAVADGVVVGSAIV
DLVAKHGADASGPVRDYIASLAAAIRAARKEPA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaccctttcccatggagcggcgacccgcctctccgccgccttcgccaagggctgtccc
gcgctcgtgaccttcgtcaccgccggtgatccctctcccgccgccaccccggcgatcctc
gacgcgctggtcgagggcggtgccgacgtgatcgagctggggatgcccttcaccgatccg
atggccgacggcccggcgatccaggcggcgaacctgcgcagcctcgcggcgggcaccacc
accgccgacatcctcgcgctcgccaaaggcttccgcgagcggcacccggacacgccgctg
gtgctgatgggttacgccaacccgatgctccgccgcggcgccgaatggttcgccgacgcc
tgcgcggcggccggcgtcgacggcgtgatctgcgtcgacgtgccccccgaggaggacgat
gcgctcggccccgcgctccgggcgaaggacgtcgcgctgatccgcctcgccacgccgacc
accgacgccgcgcgtctgcccgcggtgctgggcgacgccggcggcttcctctactacgtc
tcggtcgcgggcatcaccggtctccagcaggccgcgcaagcctcgatcgccgaggcggtc
ggccggctcaagtccgccaccgacctgcccgttgcagtcggtttcggcatccgcacgccc
gaacaggcggccgcagtggccgcggtggcggacggcgtcgtcgtcggctcggcgatcgtc
gatctcgtcgccaagcacggcgcagatgcatccggcccggtccgcgattatatcgcgtcg
ctcgcggccgcgatccgcgccgcaaggaaggaacccgcatga
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