Sphingomonas cannabina: LZK98_12940
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Entry
LZK98_12940 CDS
T08607
Name
(GenBank) glycoside hydrolase family 5 protein
Organism
scab
Sphingomonas cannabina
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Gene cluster
GFIT
Motif
Pfam:
Cellulase
DUF4434
DUF7118
Motif
Other DBs
NCBI-ProteinID:
UIJ43986
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All DBs
Position
complement(2697478..2698818)
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AA seq
446 aa
AA seq
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MKNSDTDYQILADGGFDNGVHDDSSHIPLLRELDPVNRRRAIRWLVAGAGAIVAGCGGGG
SSAETGGSIITPTPSPTPTPTPAPTPAPTPTPTPTPAPSGQDFRYGVNFASLEGTPDTLP
GRLNGEVFVTPDSHFSYYKSKGMDHIRLQGAWERLQPRTFGELGEQLLDHYADPNNPLRN
TVNLVRHYLDRAQANGLKVFLDLCHNYGSRWVGYNGSWSAKSKAQLGSSQVPISAFVDYC
TKLVQTFGSHPAVVGIELMNEPHDLAIGEAGWRDACQQSINAIRKINSSLWILIDGYGWA
SAQMWPQNNPTIHTLSDPANRIMWSAHQYFDANSSGVYGGGSESAPTNANIGVQRLAPFI
EWLKAHGFQDRGHIGEFGAPDRTEWQTIVRNFVQSADAAGLRLTAHQDIPYLNDTYTMNL
FPQTDSSGKIVGADRGVMQVLQQVAQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaatagtgacaccgattaccaaatattagctgatggcggctttgataatggggtg
catgacgattcatctcatatcccgctgcttcgcgagctcgatccggtgaaccggcgccgg
gcgatccgctggctggtcgccggcgcgggcgcgatcgtcgccggctgcggaggcgggggt
tcgtcggccgagaccggcgggtcgatcatcacgccgacgccctcgccgacaccgacacca
actcccgctccgactccggcgcccactcccacgccgacccctacaccggcgccatcggga
caggacttcagatacggtgtcaatttcgccagcctggaaggcacgcccgacacgctgccc
ggccgcctgaacggcgaggtcttcgtcaccccggacagccatttctcctattacaagtcg
aaggggatggaccacatccgcctccagggcgcctgggagcggctccagccgcgcaccttc
ggcgagctgggcgagcagctgctggatcactatgccgacccgaacaacccgctgcgcaat
accgtcaacctcgtccgccattatctcgatcgcgcccaggcgaacgggctcaaggtgttc
ctcgacctctgccataactacggctcgcgctgggtcggctacaacggcagctggtcggcg
aagtcgaaggcgcagctcggttcctcccaggtgccgatctcggcgttcgtcgattattgc
acgaagctggtgcagacgttcggcagccatcccgcggtcgtcggcatcgagctgatgaac
gaaccgcacgacctggcgatcggcgaggccggctggcgcgatgcgtgccagcagtcgatc
aacgcgatccgcaagatcaacagctcgctctggatcctgatcgacggttatggctgggcc
agcgcgcagatgtggccgcagaacaacccgacgatccacacgctgtccgatccggccaac
cgcatcatgtggtcggcgcaccagtatttcgatgcgaactcgagcggcgtctacggcggc
ggcagcgagagcgcgccgaccaacgccaacatcggcgtccagcggctcgcgccgttcatc
gaatggctgaaggcgcatggcttccaggatcgcggtcacatcggcgagttcggtgccccc
gatcgcaccgaatggcagacgatcgtgcgcaatttcgttcagtcagccgatgccgccggt
ctcaggctgacggcgcaccaggacatcccctatctgaacgatacctacacgatgaacctg
ttcccgcagacggacagctccggaaagatcgtcggggccgaccgcggcgtcatgcaggtt
ctgcagcaagtggcgcaatga
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