Sphingomonas cannabina: LZK98_13055
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Entry
LZK98_13055 CDS
T08607
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase family protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00521
Streptomycin biosynthesis
scab00523
Polyketide sugar unit biosynthesis
scab00541
Biosynthesis of various nucleotide sugars
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LZK98_13055
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LZK98_13055
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LZK98_13055
Enzymes [BR:
scab01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LZK98_13055
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UIJ44007
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Position
2722547..2723095
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AA seq
182 aa
AA seq
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MFFAPTSLADAYLIRPDRRVDDRGYFARTMCYDEFAERGLVSDFVQQSLSVTAKAGTVRG
LHFQYPPYGEAKLVRCVRGAIQDIILDLRQDSPTYLRSEGFRLDAENGHQLYVPPGFAHS
FQTLVDDVEVTYLISAPYTPDAQGGLRYDDPELGIEWPLPVAAISPRDLAWPLIHPHAPP
AL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgcgccgacatcgctggcggatgcctatctgatccggcccgaccggcgggtg
gacgatcgcggctatttcgcgcgcaccatgtgctacgacgagttcgctgagcgcgggctc
gtcagcgacttcgtgcagcagagcctgtcggtgaccgccaaggcgggaacggtccgcggc
ctgcatttccaatacccgccctatggcgaggccaagctggtccgctgcgtccgcggcgcg
atccaggacatcatcctcgacctgcgccaggattcccctacctatctgcgatcggaggga
ttcaggctggatgcggagaacggacaccagctctacgtgccgccgggcttcgcccacagc
ttccagacgctggtcgacgatgtcgaggtcacctatctcatctcggcgccttacacgccc
gacgcgcagggcgggctgcgctacgacgatcccgagctcgggatcgagtggccgctgccg
gtggcggccatctcgccgcgggacctcgcatggccgctgatccacccgcacgcgccgccc
gccctgtga
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