Sphingomonas cannabina: LZK98_13240
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Entry
LZK98_13240 CDS
T08607
Symbol
gatA
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
KO
K02433
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:
6.3.5.6
6.3.5.7
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00970
Aminoacyl-tRNA biosynthesis
scab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LZK98_13240 (gatA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
scab03029
]
LZK98_13240 (gatA)
Enzymes [BR:
scab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
LZK98_13240 (gatA)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
LZK98_13240 (gatA)
Mitochondrial biogenesis [BR:
scab03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LZK98_13240 (gatA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-ProteinID:
UIJ44042
LinkDB
All DBs
Position
complement(2766637..2768121)
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AA seq
494 aa
AA seq
DB search
MAELTDLGVAAIRDGVRAGDFSAREVADAFITRVGAAKALNAFLVETPDHALAAAKATDD
ARAAGEELKPLAGVPIGMKDLFCTAGVPATAASHILEGFTPTYESTVSGNLWRAGAGMLG
KLNMDQFAMGSSNETSHFGNVISPWRRNDGGNAPLAPGGSSGGSSAAIAARLCPGATGTD
TGGSIRQPAAFTGISGIKPTYGRCSRWGVIAFASSLDQAGPMARDVRDCAILLEAMAGFD
PKDATSLDLPVPQWEAGLSSDLKGKRIGIPREYRVDGMPAEIEALWQQGIDWLKDAGAEV
VEVSLPHTRYALPAYYIIAPAEASSNLARYDGVRYGQRELPDGAGLQDMYAATRAAGFGD
EVKRRIMIGTYVLSAGFYDAYYTQAQKVRTLIARDFEQVWEICDLLLTPTAPSAAFALGE
KSADPIAMYLNDVFTVPSSLAGLPAMSVPGGLDAGGLPLGLQIIGKPLDEQGVLDAGLAI
EQRAGFTARPDAWW
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggccgagctcaccgatctcggcgtcgcagcgatccgcgacggcgtccgcgcgggcgat
ttctccgcacgcgaggtggccgatgccttcattacccgcgtcggcgcggccaaggcgctc
aacgcctttctggtcgagactcccgatcacgcgctcgccgccgccaaggccaccgacgac
gcgcgtgcggcaggggaggagctcaagccccttgccggcgtgccgatcggcatgaaggac
ctgttctgcaccgcgggcgtgccagcgaccgcggccagccacatcctcgaaggcttcacg
ccgacctacgaatcgaccgtgtcgggcaatctctggcgcgcgggcgccgggatgctcggc
aagctcaacatggaccagttcgcgatgggctcgtccaacgagacgagccatttcggcaac
gtcatctcgccatggcgtcgcaacgacggcggcaacgctccgctcgcgccgggcgggtcc
tcgggcggaagctcggcggcgatcgcggcgcggctgtgcccgggcgcgaccggaaccgac
accggcggctcgatccgccagccggccgccttcaccggcatctcgggcatcaagccgacc
tacggccgctgctcgcgctggggcgtgatcgcctttgcctcctcgctcgatcaggcgggg
ccgatggcgcgcgacgtgcgcgactgcgcgatcctgctggaggcgatggcgggattcgat
cccaaggacgcgacctcgctcgacctgccggtgccgcagtgggaagcgggattatcaagc
gatctcaagggcaagcggatcggtattcccagggagtatcgggtcgacggcatgcccgcc
gaaatcgaggcgctgtggcagcagggcattgactggctgaaggacgccggcgccgaggtc
gtcgaggtgtcgctgccgcatacccgatacgcccttccggcctattacatcatcgcgccg
gcggaggcgtcgtcgaacctcgcccgctacgacggcgtgcgctacggccagcgcgagctg
cccgacggcgccggcctgcaggacatgtatgcggcgacgcgcgcggccggcttcggcgac
gaggtcaagcgccgcatcatgatcggcacctatgtgctctcggccggcttctacgatgcc
tattacacccaggcgcagaaggtccgcaccctgatcgcgcgcgatttcgagcaggtgtgg
gagatctgcgatctgctgctgaccccgaccgcgccctcggccgccttcgccctgggcgag
aagagcgccgatccgatcgcgatgtacctgaacgacgtcttcaccgtgccgtcgagcctc
gccggcctgccggcgatgagcgtgccgggcggcctcgacgcgggcggcttgccgctcggc
ctccagatcatcggcaagccgctcgacgagcagggcgtcctcgacgccggcctggcgatc
gagcagcgtgcgggcttcacggcccggccggatgcctggtggtag
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