Sphingomonas cannabina: LZK98_14050
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Entry
LZK98_14050 CDS
T08607
Name
(GenBank) AAA family ATPase
KO
K08482
circadian clock protein KaiC
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
LZK98_14050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
nSTAND3
AAA_22
AAA_16
RecA
AAA_29
NACHT
DnaB_C
IstB_IS21
PAXNEB
AAA_24
AAA_5
SLFN-g3_helicase
ABC_tran
AAA_33
TniB
AAA_7
GvpD_P-loop
nSTAND1
Zot
AAA_11
P-loop_TraG
PhoH
APS_kinase
FtsK_SpoIIIE
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
UIJ44192
LinkDB
All DBs
Position
complement(2927042..2928547)
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AA seq
501 aa
AA seq
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MELEYRPTTLIPTGVPGLDPILAGGYAENRVHLIEGQPGSGKTSMALQFLMDGAKRGELG
LYVTLSETTAELCAVAASHGWTFDGIEIFEMIPPELSLDPNAQQTVLYSSELELGETVRM
VMAEVERVKPKRLVFDSLSEIRLLSQGSLRYRRQVLALKHFFLKLGCTVLMLDDLTSEQD
DLNLHSISHGVLRLEQVAALYGAERRRLRCIKMRAVKFRGGYHDFTIERGGLRVYPRLVA
ADHHVDFAADIVSSGVPALDALVGGGLDRGTSTLVIGPSGSGKSSLAMQFVYAALKRGEP
ALTLVFDEVRSVFLRRAQGMGFDLMPFLDQGLLRLRQIDPAELTPGELTATVRDAVEGHG
ARIVVLDSLSGYLNAMPEEHFMMLQMHEMLSYLNQQGIVTILVLAQHGMVGHMASPVDLT
YLSDAVIMLRFFEAGGKLRRALSVLKKRTGHHEETIREYRISSRGVAVGEALTEFQGVLT
GVPTYIGADSNLLGETVGHGE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaactggagtaccgcccaactaccctgattccgacgggcgtgccgggcctcgatccg
attctggcgggtggatatgccgagaatcgcgttcatctgatcgaggggcagcccgggtcg
ggcaagaccagcatggcgctgcagttcctgatggatggcgcgaaacggggagagctcggc
ctctacgtcaccttgtcggagacgacggccgagctctgcgcggtcgcggccagccatggc
tggacgttcgacggcatcgaaatcttcgagatgattcctcccgagctgtcgcttgatccc
aatgcgcagcagacggtgctctactcgtccgagctcgagcttggcgaaaccgtccggatg
gtcatggccgaggtcgagcgggtcaagcccaagcggctggtgttcgacagcctgtcggag
atccgtctgctctcgcaggggtcgctgcgctatcggcggcaggtgctggcgctcaagcac
ttcttcctgaagctgggctgcacggtgctgatgctcgacgacctgacctccgagcaggac
gatctcaacctacacagcatcagccatggcgtgctgcgcctcgagcaggtcgcggcgctg
tacggggccgaacgccggcgcctgcgctgcatcaagatgcgcgcggtcaagttccgcggc
ggctatcatgatttcacgatcgagcgcggcggtttgcgcgtctatccacgtctggtcgcg
gccgatcatcatgtcgatttcgcggcggacatcgtcagcagcggggttccggcgctcgat
gcgctggtcggcggcggtctcgatcgtggcaccagtacgttggtcatcggcccatccggc
tcgggcaagtcatcgctcgcgatgcagttcgtctatgccgcgctcaagcggggcgaaccc
gcgctgaccctggtgttcgacgaggtgcgcagcgtgttcctgcgccgcgcgcagggcatg
ggcttcgacctcatgccgttcctcgatcaggggctgctcaggctgcgccagatcgatcca
gcggaattgacgccgggcgagctcaccgccacggtccgcgacgccgtcgaggggcacggc
gcccgcatcgtggtcctcgacagcctcagcggctatctgaacgccatgcccgaggagcat
ttcatgatgctccagatgcatgagatgctgtcctatctgaaccagcagggcatcgtgacg
atcctggtgctcgcccagcacggtatggtcgggcacatggcgagcccggtcgacctcacc
tatctcagcgacgccgtcatcatgctgcgattcttcgaagccggcggcaagctgcgacgg
gcgctgtcggtgctcaagaagcgcaccggccatcatgaggagacgatccgcgaatatcgg
atcagctcgcgcggcgttgcggtcggcgaggcgctgaccgagtttcagggcgtgctgacc
ggcgtgccgacctatataggtgcggactcgaacctcctcggcgagaccgtcgggcatggg
gaatga
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