Sphingomonas cannabina: LZK98_14375
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Entry
LZK98_14375 CDS
T08607
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_14375
Transporters [BR:
scab02000
]
Other transporters
Pores ion channels [TC:
1
]
LZK98_14375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UIJ44250
LinkDB
All DBs
Position
3007893..3009932
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AA seq
679 aa
AA seq
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MLRSAASLAAMLPCAAQASNQAGSTAPPDIVVTASALDQKADETATPVITLSGDALVHRR
QATLGDTLAGQPGISFDNFGGGASRPVIRGQTAPRVQALSDGANVQDASAISPDHAVTTE
PLLLTGVEVLRGPAALLYGGGAIGGAINLLDEKVPTRLPDGGISGVAEGRIGTADDERSL
VGGLTAGIGPFAFHAEGVHRSSDDYRVPKAFGASRVAGSYNDTSTFSVGGSWIGPDGYLG
VAYTRQRSEYGLPGHSHDYEDCHPHGTHLHCGGHGHDDDDHDHDHGDDHDHDHEGVPFVK
LRSERFDIRSDYRDPLPGFEKVRFRMSFTDYAHDEIEGDEVATTFRNKARDIRLELTHKP
IAGLRGVFGVQHSESDFSALGEEAFLPESETRSTALFLMETLQAGPVRFELAGRQEWQTI
ETSLNRRVSHKPLSISGAAVWDIGGTYSLALSLARSQRAPNVQELYARGIHLATNTYELG
TDTLGKETARSIDLTFRKTSGATTFTLGGYHQDFDNYIFAETLDRFEDFRLIRYTGADAT
FTGVDGEIRHQFTPDFGASLFGDYVRAKLRHGLGNLPRIPAGRLGGRADGKWGALSADVE
YYHVFEQGRIASFETRTPGYDMVNATLSYRLDLAPGKTAELFVRGTNLANELAFNHASFI
KEASPLRGRNFVFGLRTAF
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgctccgctccgccgcatcgcttgcggcgatgctgccctgcgccgcgcaggcgtccaat
caggccggcagcaccgcgccgcccgatatcgtcgtcaccgcctccgcgctcgaccagaag
gcggacgagaccgcgacgccggtcatcactctgtcgggcgacgcgctggtgcatcgccgc
caggcgacgctgggcgacacgctcgccggccagccgggcatcagcttcgataatttcggc
ggcggcgcgagccggccggtgatccgcggccagaccgcgccgcgggtccaggcgctgtcg
gacggcgccaacgtccaggacgcctcggcgatctcgcccgaccatgccgtcaccaccgag
ccgctgctgctcaccggcgtcgaggtgctgcgcggtcccgccgccctgctctatggcggc
ggcgcgatcggcggcgcgatcaacctgctcgacgagaaggtgccgaccaggcttcccgac
ggcggcatctccggcgtggcggaaggccgcatcggcaccgccgacgacgaacgctcgctg
gtgggcgggctcaccgccgggatcggccccttcgccttccatgccgagggcgtccaccgc
agttccgacgactatcgcgtgccgaaggcgttcggcgcctcgcgcgtcgccggatcctac
aacgacacctcgacgttcagcgtcggcgggtcgtggatcggccccgacggctatctgggc
gtggcctatacccgccagcgcagcgaatacggcctgcccggccactcccacgactatgag
gactgccacccgcatggcacgcacctccattgcggcgggcacggccatgacgacgacgat
catgaccatgatcacggcgacgatcacgaccatgatcacgagggcgtgccgttcgtgaag
ctccgcagcgagcggttcgacatccgcagcgactatcgcgatccgctgccgggcttcgaa
aaggtccgcttccgcatgtcgttcaccgactatgcgcacgacgagatcgagggtgacgag
gtcgccacaaccttcaggaacaaggcccgcgacatccgcctcgagctgacgcacaagccc
attgcgggcctgcgcggcgtgttcggcgtccagcattcggaaagcgacttcagcgcgctc
ggcgaggaagcctttctccccgaaagcgagacgcgcagcaccgccctgttcctgatggag
acattgcaggcaggccccgtccgcttcgagctcgccggacgtcaggaatggcagacgatc
gagacctcgctcaaccgccgggtcagccacaagccgctctcgatctccggcgcggcggtc
tgggacatcggcggcacctattcgctggcgctgtcgctcgcccgctcgcagcgcgcaccc
aacgtccaggagctctacgcgcgcggcatccacctcgcgaccaatacctatgagctcggc
accgacacgctcggcaaggaaacggccaggtcgatcgacctcaccttccgcaagacgtcg
ggcgcgacgaccttcaccctcggcggctatcaccaggatttcgacaactacatcttcgcc
gagacgctcgaccggttcgaggacttccggctgatccgctacaccggcgcggacgcgacc
ttcaccggcgtcgacggcgagatccggcaccagttcacgccggacttcggtgcctcgctc
ttcggcgactatgtacgggcgaagctcaggcacggcctcggcaacctaccgcgcatcccg
gcggggcgcctcggcggccgcgccgacggcaaatggggcgcgctgtcggcggatgtcgaa
tactaccatgtcttcgagcagggccgcatcgcatcgttcgagacgcggaccccgggctac
gacatggtcaacgcgacgctgtcctatcgactggacctggctcccggaaagaccgccgag
ctgttcgtccgcggaaccaacctcgccaacgagctggcgttcaaccacgcctcgttcatc
aaggaagcctcgcccttgcgcggtcgcaacttcgtgttcggcctgcggacagcgttttga
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