Sphingomonas cannabina: LZK98_14470
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Entry
LZK98_14470 CDS
T08607
Name
(GenBank) PAS-domain containing protein
Organism
scab
Sphingomonas cannabina
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
HisKA
PAS_4
PAS_8
HATPase_c_2
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UIJ47427
LinkDB
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Position
complement(3033762..3036107)
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AA seq
781 aa
AA seq
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MITISTTAAMIAGAVLAVLVVGAAAMLYVGLAGRRSGVRLKDVARRDAALLASGPAQAAL
VRSDGRIELPQRVADWLGLATEPRYLTDLSAPDTGLDPADAEILAGEVTAAAKAGRPFRL
SVATRGSARKLIVSGARAPEAALAPGGVVLWFFDATESEEEIARLAQESERLHAAFDALA
GLIEAAPMPMWYRDRNLALTMVNTAYVRAVEGEDARDVIDRGLELVEGGAIGGPLANAAI
ARDTREPQVAAVPATIGGARRMLRIHDVPLPSGGVAGFAVDIEELEQARGGIKRFADAQR
AMLDRLSAGVAQFGPDRGLSFCNQPFRRIFAMREEWVKDRPEFDRVLERMREAGRLPEVR
DFPGWKAERRDWFLSANQEAIEEPWHLPGGTHLRVVAQPLPDGGLLVIFEDRTEQVQLAS
ARDTLLRVRTATFDNLFEALGVFASDGRLQIWNQKFRLLWGFEEALLNKHPRVDDLAKRA
SEKLENPARASLIGELVRSATAERQQRGGRVSFADGRHFEFAAVPLPDGNALLTMLDITD
SRRIERALTDRNEALEEADRVKTQFVANMSYELRTPLTSIKGFAELLHGGYAGELSENGT
GYVQAILESVERLSALVDDVLDLTQDSRAGERVTVDLELTANAAAETVAASARAKRIGLA
LDVLGSAGSVTGDPERLRQTIEHLLRHAISCTHEGGRVLLHLDGDEVKARIVVSDDGPGM
DKTAVARAFDRFARPGITQSGERALGLGLPLAKQFVEAHGGTISLISEQGEGTLVTVELP
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccatttcgaccactgccgcgatgatcgccggtgcagtgctggcggtgctcgtc
gtcggggccgcagcaatgctctatgttggcctcgcagggcggcgcagcggcgtacgcctg
aaggacgttgcccggcgcgatgccgcgttgctggcgagcgggcccgcgcaggcggcgctg
gtgcgctcggatggacggatcgagctgccgcaacgggtcgccgactggctggggctggcg
acggagcccagatacctcaccgatctctcggcgcccgataccggactcgatcccgcggat
gccgagatactagccggtgaagtgaccgccgccgccaaggcgggacggccgttccgcctt
tccgttgcgacgcgcggatcggcgcgcaagctcatcgtcagcggtgcgcgcgcacctgag
gcggcgctggcgccgggcggcgtggtgctgtggttcttcgacgcgaccgagagcgaggag
gagatcgcccggctcgcgcaggagagcgagcggctgcacgccgccttcgacgcgctggcc
ggtctgatcgaggcggcgccgatgccgatgtggtaccgcgaccgcaacctggcgctcacc
atggtcaacaccgcctatgtccgcgccgtcgagggcgaggacgcgcgcgacgtgatcgac
cgcgggctcgagctggtcgagggcggcgcgatcgggggaccgctcgccaatgccgctatc
gcgcgtgacaccagggagccgcaggtggcggcggtgccggcgacgatcgggggcgcgcgg
cggatgctgcgcatccatgacgtgccgctgccttcgggcggcgtggcgggcttcgcggtc
gacatcgaggaacttgagcaggcgcggggcgggatcaagcgcttcgccgatgcgcagcgg
gcgatgctcgaccggctctccgccggcgtcgcgcagttcgggccggaccgggggctcagc
ttctgcaatcagccgtttcgccgcatcttcgcgatgcgcgaggaatgggtgaaggaccgg
ccggagttcgatcgcgtgctcgagcggatgcgcgaggcggggcggctgcccgaggtgcgc
gacttccccggctggaaggccgagcggcgcgactggttcctgagcgccaaccaggaggcg
atcgaggagccgtggcacctgcccggcggcacgcatctgcgcgtggtggcgcagccgctg
cccgatggcgggctgctggtgatcttcgaggaccgcaccgaacaggtccagctcgccagc
gcgcgcgacacgctgctgcgcgtccggaccgcgacgttcgacaatctgttcgaggcgctg
ggggtgttcgcctcggacggtcggctgcagatctggaaccagaagttccgcctgctgtgg
ggcttcgaggaggcattgctcaataagcatcctcgcgtcgacgatctggcgaagcgggcg
agcgagaagctggagaatccggcccgcgcgtcgctgatcggcgagctggtgcgctccgcc
accgccgagcggcagcagcgcggcggacgggtgagcttcgccgacgggcggcatttcgag
ttcgcggcggtgccgctgccggacggcaacgcgctgctgacgatgctcgacatcaccgac
agccggcggatcgaacgggcgctcaccgaccgcaacgaagcgctggaggaggccgatcgg
gtcaagacccagttcgtcgccaacatgagctacgagctccgcacgccgctcacctcgatc
aaggggttcgccgaattgctccacggcggctatgcgggggagctcagcgagaacggcacc
ggttacgtccaggcgatcctcgaatcggtcgagcggctgtccgcgctggtcgacgacgtg
ctcgacctgacgcaggactcgagggcaggcgaacgggtgacggtcgacctggagctgacc
gccaatgccgcggccgagaccgtggcggcgtcggcgcgggcgaagcggatcgggcttgcg
ctggacgtgctgggatcggcgggcagcgtcaccggcgatcccgagcggttgcgacagacg
atcgagcatctgctgcgccatgccatctcgtgcacgcatgaaggcggacgggtgctgctg
catctcgacggcgacgaggtcaaggcgcggatcgtggtgtccgacgacggaccgggcatg
gacaagacggcggtggcgcgggcgttcgatcgcttcgcccggccggggatcacgcagagc
ggcgagcgggcgctggggctggggctgccgctcgctaagcagttcgtcgaggcgcacggc
gggacgatctcgctgatcagcgagcagggggaggggacgctggtcaccgtggagctgccg
cggtga
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