Sphingomonas cannabina: LZK98_15150
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Entry
LZK98_15150 CDS
T08607
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00300
Lysine biosynthesis
scab01100
Metabolic pathways
scab01120
Microbial metabolism in diverse environments
scab01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LZK98_15150 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scab01002
]
LZK98_15150 (dapE)
Enzymes [BR:
scab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LZK98_15150 (dapE)
Peptidases and inhibitors [BR:
scab01002
]
Metallo peptidases
Family M20
LZK98_15150 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
DUF4687
Motif
Other DBs
NCBI-ProteinID:
UIJ44392
LinkDB
All DBs
Position
3206978..3208102
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AA seq
374 aa
AA seq
DB search
MTRDAVDVVALAKALIECESVTPARGPVFDVLEAALVPLGFAVDRFVAGGEVENLLAVRG
SGGQHFAFAGHVDVVPPGEGWTSGPFEGAIRGDLLYGRGAVDMKGAVAAFVAAVAVAPAE
GTVSLIITGDEEGPALHGTRALIDRMAERGLTPDLCLVGEPTSAQRLGDTVKIGRRGSVN
IWIDVPGRQGHVAYPHLADNPIPKLVAALAEIDAVVLDHGSEWFQPSNIEPTDLAVGNPA
TNVIPGAASARLSIRFNDQQRGQDLVELIRSIVHSHAPEADVRAMISGEAFLTQPGAFST
MVSDAIEAQLGVRPELSTTGGTSDARFLSKLCPTVEFGLVNATMHKLDEAVALADLRALS
AVYADILQRALSSP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgacgagagatgcggtggatgtcgtagcgctggcgaaggcgctgatcgagtgcgaaagc
gtgacgccggcgcgcgggccggtattcgacgtgctggaagcggcgctggtcccgctcggc
ttcgcggtcgaccggttcgtggcgggcggcgaggtcgagaacctgctcgcggtgcgcggc
tcgggcgggcagcatttcgccttcgccggccatgtcgacgtcgtgccgccgggcgaaggc
tggaccagcggcccgttcgagggcgcgatccgcggcgacctgctctacggacgcggggcg
gtcgacatgaagggcgccgtcgccgccttcgtcgccgctgtcgccgtcgcgccggccgag
ggcaccgtcagcctgatcatcaccggcgatgaggaaggccccgccctccacggcacccgc
gcgctgatcgatcgcatggccgagcgcggcctgacgcccgacctctgcctggtcggcgag
cctacgtccgcccagcgcctcggcgacacggtcaagatcggccggcgcggctcggtcaac
atctggatcgacgtgccggggcggcagggccatgtcgcctaccctcatctcgccgacaat
ccgatcccgaagctggtcgccgccttggcggagatcgacgcggtggtgctcgaccacggc
agcgaatggttccagccgtcaaacatcgagccgaccgacctcgccgtcggcaatcccgcg
accaacgtcatccccggcgccgcctcggcccggctcagcatccgcttcaacgaccagcag
cgtgggcaagatctggtcgagctgatccgcagcatcgtccactcccacgcaccggaggcc
gacgtgcgggcgatgatctcgggcgaggcgtttctgacgcagcccggcgccttctcgacg
atggtttccgacgcgatcgaggcgcagctgggcgtgcggcccgaactcagcaccaccggc
ggcacctccgacgcacgcttcctttcgaaactatgcccgacggtcgagttcggcctcgtc
aacgcgacgatgcacaagctcgacgaagcggtcgcgctcgccgacctccgcgcgctctcg
gcggtctacgccgacattctccagcgggcgctgtcgtccccctga
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