Sphingomonas cannabina: LZK98_15980
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Entry
LZK98_15980 CDS
T08607
Name
(GenBank) pilus assembly protein N-terminal domain-containing protein
KO
K02280
pilus assembly protein CpaC
Organism
scab
Sphingomonas cannabina
Pathway
scab02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LZK98_15980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
scab02044
]
LZK98_15980
02035 Bacterial motility proteins [BR:
scab02035
]
LZK98_15980
Secretion system [BR:
scab02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
LZK98_15980
Bacterial motility proteins [BR:
scab02035
]
Pilus system
Pilus assembly proteins
LZK98_15980
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
UIJ44547
LinkDB
All DBs
Position
3383354..3384985
Genome browser
AA seq
543 aa
AA seq
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MHRKTFLRRSLAATVATALVAGTAATARPGPAERAGPARVAKFPAGAQRPTTEVTLSVGQ
GELVNLPASVASVWTSNPAVADVFVNNPRQIHLFGKEFGEATVFATAANGSVVYATNVRV
SQNITSIDRMMKLAMPDADVKVTTVGQIAVLTGTVASPDDSAEAQRLVTALLNPGVNVNS
PDAQLKIGVVNRLRTATPLQVNLQVRIAEVSRSFVKNIGVNMTTFDPTGGFKFGIGQGRK
IFNQYAPGGPLGVGDEASNGVTSVIKSPNGTSLFGNGKLFGMDVLGGLDLGEQLGQVTTL
ANPNLTALSGETATFLAGGEVPILISQPLGGVTVEYKQYGVSLAYTPTVLSDGRISLRVR
PEVSELSAAGAIVVGNTQIPAMTTRRTETTVELGSGESLVIGGLLSNRHDNGFDKTPGVG
DLPILGALFRSNSFKRNESELVIVVTPYLVKPVNANEIALPTDGYKAPTDLGRIFMGELA
SGQSGASRPKPSMATPSAPSPSIGAVAPLTPAPVAPQRQETAPAPEPRKVKKDAGAMPGF
SFR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcataggaaaaccttcctgcggcgatcgctcgcggcgacggtggctacggcccttgtc
gcgggcaccgcagccaccgcacgtccgggcccagcggaacgggcaggaccggcccgagtc
gccaagttcccggccggcgcccagcgcccgaccacggaagtcacgctgtcggtcggtcag
ggcgaactcgtcaacctgcccgcgagcgtcgcgagcgtgtggacgtcgaacccggcggtc
gcggacgtcttcgtcaacaatccgcgccagatccatctcttcggcaaggagttcggcgag
gcgaccgtgttcgccaccgcggccaacggttcggtggtctatgccaccaacgtccgcgtc
agccagaacatcacctcgatcgatcggatgatgaagctggcgatgcccgacgccgacgtg
aaggtcacgacggtcggccagatcgcggtgctgaccggcaccgtcgcctcgcccgacgac
agcgccgaggcgcagcggctggtgacggcgctgctcaaccccggcgtcaacgtgaactca
ccggacgcgcagctcaagatcggcgtggtgaaccgcctgcgtaccgcgacgccgctgcag
gtcaacctgcaggtgcgcatcgccgaggtgagccgtagcttcgtcaagaatattggcgtc
aacatgaccacgttcgacccgacgggcgggttcaagttcggcatcggccagggccgcaag
atcttcaaccaatatgctcccggcggaccgctcggagttggcgacgaagcgtccaacggc
gtcacctcggtgatcaagagcccgaacggcacctcgctgttcggcaatggcaagctgttc
ggcatggacgtcctgggcgggctcgacctgggcgagcagctgggtcaggtgaccaccctc
gccaacccgaacctcaccgccctgtcgggcgagaccgcgaccttcctcgccggtggcgag
gttccgatcctgatcagccagccgctgggcggcgtcacggtcgaatacaagcaatatggc
gtcagcctcgcctacacgccgacggtgctgagcgacgggcgtatctcgctgcgcgtccgg
ccggaagtgtcggagctgtcggccgcgggcgcgatcgtggtcggcaatacgcagattccc
gcgatgaccactcgccgcaccgaaacgacggtcgagctgggctcgggcgaaagccttgtg
atcggcggcctgctgtcgaaccggcacgacaacggtttcgacaagacgccgggcgtcggc
gacctgccgatccttggcgccctgttccgctcgaacagcttcaagcgcaatgaatccgag
ctggtcatcgtcgtgacgccgtatctggtgaagccggtcaacgcgaacgagatcgccctg
cccaccgacggctacaaggcgccgaccgacctcggccgcatcttcatgggcgagctggcg
agcggccagagcggcgcttcgcggcccaagccgtcgatggcgacgccgtcggcgccgtcc
ccgtcgatcggcgcagtggcgcccctgaccccggcaccggtggcgccgcagcggcaggag
accgccccggcgcccgaaccgcgcaaggtcaagaaggacgccggcgccatgcccggcttc
agcttccggtga
DBGET
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