Sphingomonas cannabina: LZK98_16120
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Entry
LZK98_16120 CDS
T08607
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
scab
Sphingomonas cannabina
Pathway
scab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LZK98_16120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scab03400
]
LZK98_16120
Enzymes [BR:
scab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LZK98_16120
DNA repair and recombination proteins [BR:
scab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LZK98_16120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UIJ44570
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All DBs
Position
3411311..3411928
Genome browser
AA seq
205 aa
AA seq
DB search
MGLSAEQLRISIDALASIEPAFAVALQRAGYPEPRIRARGYETLLRTIVGQQVSVAAAQS
IWARMEATLGDLTDPANVAKASDEMLRASGLSRQKASYARSLAEEVAGGRLDLANLPEDD
EEAIAALTGIKGIGRWSAEIYLLFAEGRPDVWPAGDLAVQVEVGRLLGHAERPSEKAVRA
LAEPWRPHRGAAAIMAWHHYKIEVI
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgggcctatccgccgaacagctccgcatctcgatcgacgcgctggcttccatcgaaccg
gcgttcgccgtcgcgctgcaacgcgccggctatccggagccccgcatccgcgcgcgtggc
tatgagacgctgcttcggaccatcgtcggccagcaggtgagcgtcgccgcggcgcaatcg
atctgggctaggatggaagcgacgctcggcgatctcaccgatccggcgaacgtcgccaaa
gcctccgacgagatgctacgtgccagcggcctctcacggcagaaggcaagctatgcccgc
agcctcgccgaggaggtcgccggcggccggctcgaccttgcgaacctcccggaggacgac
gaggaggcgatcgcggcgctgaccggcatcaagggcatcggccgctggtcggccgaaatc
tacctgctgttcgccgaggggaggcccgatgtgtggcccgccggcgacctggcggtgcag
gtcgaggtcgggcggctgctcggccatgccgaacggcccagcgagaaggctgtgcgtgcc
ctcgccgagccatggcggccgcaccgcggcgcggccgcgatcatggcctggcaccactac
aagatcgaggtgatctga
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