KEGG   Sphingomonas cannabina: LZK98_16130
Entry
LZK98_16130       CDS       T08607                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
scab  Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:scab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scab03032]
    LZK98_16130 (parE)
   03036 Chromosome and associated proteins [BR:scab03036]
    LZK98_16130 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:scab02048]
    LZK98_16130 (parE)
Enzymes [BR:scab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LZK98_16130 (parE)
DNA replication proteins [BR:scab03032]
 Prokaryotic type
  DNA Topoisomerases
   LZK98_16130 (parE)
Chromosome and associated proteins [BR:scab03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LZK98_16130 (parE)
Prokaryotic defense system [BR:scab02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    LZK98_16130 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: UIJ44572
LinkDB
Position
3412253..3414232
AA seq 659 aa
MSEDLFAAPIPSSNDYDASSIEVLEGLEPVRRRPGMYIGGTDERALHHLAAEVLDNAMDE
AVAGHATRIEVTLEPGNRLTIVDNGRGIPVDPHPKFKDKSALEVILSTLHSGGKFNGKAY
ATSGGLHGVGVSVVNALSKDTVIEVARDRQLYRQSFSRGVTLGPLEHVGGTPNRRGTSVA
FTPDDEIFGPEMHFKPARLYKLARSKAYLFAGVEIRWKCDPSIITDDTPPEAVFQFPGGL
GDHLREQLAGRECATADFFAGRQDFPDEQGRVEWAVAWPLWSDGSYSWYCNTIPTPDGGT
HEQGLRQALTRGLRAFGDLVGQKKAKDITADDVMTGSELMLSVFIRDPQFQSQTKDRLTS
PEATALVERAVRDHFDHFLADNMERGRALLGYVLERMDERLRRKAEREVKRKTATSGRKL
RLPGKLTDCAADSPEGTELFIVEGDSAGGSAKQARDRKTQAILPIRGKILNVASATSAKI
LANQEIADLIQALGCGTRKDCVPDNLRYERIVIMTDADVDGAHIATLLMTFFFQEMPELV
RRGHLYLAQPPLFRLTVGSKSIYARDDAHRAEIEANEFKGKKVEVSRFKGLGEMNPQQLK
ETTMDPATRQLLRITLPQEYEERAGVKDLVDRLMGNNPAHRFAFIQENAARLEEEAIDA
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgtccgaagatctgttcgccgcgcccatcccctcctccaacgactacgacgcatcgtcg
atcgaggtcctcgaagggctggagccggtccggcgccgtccgggcatgtacatcggcggc
accgacgaacgcgcgctccaccacctcgcggccgaggtcctcgacaatgcgatggacgaa
gcggtggccgggcacgccacacggatcgaagtgacgctggagcccggcaaccgtctcacc
atcgtcgacaatgggagaggtatacccgtcgatccccacccgaagttcaaagacaagtcc
gctctggaggtgatcctctcgacgctccattccggcggcaagttcaacggcaaggcctat
gcgacctcgggcggcctgcacggcgtcggcgtcagcgtggtcaacgcgctgagcaaggac
acggtgatcgaggtcgcccgcgaccggcaactctatcgccagagcttctcgcgcggcgtg
acgctggggccgctcgagcatgtcggcggcacccccaaccggcgcggcaccagcgtcgcc
ttcacccccgacgacgagatcttcgggccggagatgcacttcaagccggcgcggctctac
aagctcgcccgctccaaggcctatctgttcgccggcgtcgagatccgctggaaatgcgat
ccctcgatcatcaccgacgacacgccgcccgaggcggtgttccagttccccggcggcctc
ggcgaccatctgcgcgagcagctcgccggacgggagtgcgcgaccgcggacttcttcgcg
gggcggcaggatttccccgacgagcagggccgcgtcgaatgggcggtggcgtggcccttg
tggtccgacggcagctacagctggtactgcaacaccattcccacgcccgacggcggtacc
catgagcagggcctgcgccaggcgctcacccgcggcctgcgtgcgttcggcgacctcgtc
gggcagaagaaggcaaaggacatcaccgccgacgacgtgatgaccggatcggagctgatg
ctctcggtcttcatccgcgacccgcagttccagagccagaccaaggaccgcctcacctcg
cccgaggcgaccgcgctggtcgagcgcgcggtgcgcgaccatttcgaccatttcctcgcc
gacaacatggagcgcggccgcgcgctgctcggctacgtcctcgagcggatggacgagcgc
ctgcgccgcaaggccgagcgcgaggtcaagcgcaagaccgccacctcgggccgcaagctc
cgcctccccggcaagctcaccgactgcgccgccgacagcccggaggggaccgagctgttc
atcgtcgagggcgattcggccggcggctcggccaagcaggcgcgcgaccgcaagacgcag
gcgatcctgccgatccggggcaagatcctgaacgtcgcctccgccacctcggccaagatc
ctggccaaccaggagatcgccgacctgatccaggcgctgggctgcggcacgcggaaggac
tgcgtccccgacaacctgcgctacgagcgcatcgtcatcatgaccgacgccgacgtcgac
ggggcgcacatcgccacgctgctgatgaccttcttcttccaggagatgccggagctggta
cggcgcgggcacctctatctcgcccagccgccacttttccgcctgacggtgggatcgaag
tcgatctatgcccgcgacgacgcccaccgcgccgagatcgaggcgaacgagttcaagggc
aagaaggtcgaggtgtcgcgcttcaaggggctgggcgagatgaacccgcagcagctcaag
gaaacgacgatggacccggcgacgcgccagctcctccgcatcacgctgccgcaggaatat
gaggagcgcgccggggtgaaggacctggtcgaccggctgatgggcaacaacccggcgcac
cgcttcgccttcatccaggagaacgccgcgcggctggaggaagaggcgatcgacgcctga

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