Sphingomonas cannabina: LZK98_16990
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Entry
LZK98_16990 CDS
T08607
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scab03009
]
LZK98_16990
Enzymes [BR:
scab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LZK98_16990
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LZK98_16990
Ribosome biogenesis [BR:
scab03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LZK98_16990
23S rRNA modification factors
LZK98_16990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
Methyltransf_25
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
UIJ44732
LinkDB
All DBs
Position
3604699..3605442
Genome browser
AA seq
247 aa
AA seq
DB search
MVKHRADQLLVDRGFAESRTRAQALIMAGLVFAGDRKVEKPGQALPEDAAIEVRGRDHPW
VSRGGIKLAHGFDHFGWDVTGAVAIDVGSSTGGFTDVLLTRGAARVYAVDSGTNQLAWKL
RQDPRVIVHEQTSARVLTPAHIPELVDLIVCDASFIGLSKVLEVPLGFTGPEARAMALIK
PQFEAGRDEVGKGGVVRDPAVHARVCDEVAAWFETQGWRVEGVTPSPITGPEGNVEFLIA
AIRANPS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaacatcgcgccgatcagctgctcgtcgatcgcggattcgcggaaagccgcacg
cgcgcccaggcgctgatcatggcgggcctcgtcttcgccggcgaccgtaaggtcgagaag
ccgggccaggcgctgccggaggacgccgcgatcgaggtgcgcgggcgcgaccacccatgg
gtgtcgcgcggggggatcaagcttgcgcatgggttcgaccatttcggctgggacgtgacc
ggcgcggtggcgatcgacgtgggatcgtcgaccggaggcttcactgacgtgttgctgacc
cgaggcgccgcccgggtctatgcggtcgattcgggcaccaaccagctcgcctggaagctg
cgccaggatccgcgcgtgatcgtccacgagcagaccagtgcgcgcgtgctgaccccggcg
catatccccgagctggtcgacctgatcgtatgcgacgcgagcttcatcggcctgtccaag
gtgctggaggtgccgctcggcttcaccggaccggaggcccgcgcgatggcattgatcaag
ccccagttcgaagcagggcgcgacgaggtcggcaagggcggcgtggtgcgcgacccggca
gtgcacgcccgcgtctgcgacgaggtcgccgcctggttcgagacgcagggctggcgggtc
gaaggggtgacgccgagcccgattaccgggcccgaaggcaacgtcgagttcttgatcgcc
gcgatcagggcgaatccaagctga
DBGET
integrated database retrieval system
