KEGG   Sphingomonas cannabina: LZK98_17085
Entry
LZK98_17085       CDS       T08607                                 
Symbol
trbB
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
scab  Sphingomonas cannabina
Pathway
scab02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:scab00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LZK98_17085 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:scab02044]
    LZK98_17085 (trbB)
Enzymes [BR:scab01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     LZK98_17085 (trbB)
Secretion system [BR:scab02044]
 Type IV secretion system
  Trb secretion system protein
   LZK98_17085 (trbB)
SSDB
Motif
Pfam: T2SSE Zeta_toxin nSTAND3 FtsK_SpoIIIE DEAD TrwB_AAD_bind MobB ATPase AAA_28 IstB_IS21 GTP_EFTU Mg_chelatase ABC_tran AAA_16 AAA_7 AAA_29 CbiA Dynamin_N ATPase_2 AAA_19 RecA ResIII CLP1_P P-loop_TraG KTI12
Other DBs
NCBI-ProteinID: UIJ44750
LinkDB
Position
complement(3620460..3621446)
AA seq 328 aa
MSAGLSDDRRRAMLRTAMGPAIAAALSDARVLEVMVNPDGALRLDILGAGRVDTGARLDA
AQVERIIRLVASHSRTEIHAGAPIVSAELPPHGGGAGERFEGILPPVSTAPCFSIRKPAT
RVYTLADYVADGIMSADVARLLSLAVVERRNILVAGGTSSGKTTLANALLAEMAHLDERV
ILIEDTRELQSPAADTVALRTRAGAVSMTDLVRSTLRLRPDRIIVGEVRGPEALDMLKAW
NTGHPGGIATVHANSALAALYRIEQLVQEAVFTVPRRLIADAIDLVVFIAGRGTARRVES
LARVAGLDPDGGYAVLDLTSPKNLIPGA
NT seq 987 nt   +upstreamnt  +downstreamnt
atgagcgccggcctttccgacgatcgccgccgcgcgatgctgcgtaccgccatgggcccg
gcgatcgccgcggcgctgtccgatgcgcgtgtgctcgaggtgatggtcaatcccgacggc
gcgctccgcctcgacatcctcggcgcaggccgcgtcgataccggcgcccggctcgacgcc
gcccaggtcgaacgtatcatccgcctcgtcgccagccactcgcgcaccgagatccatgcc
ggcgcgccgatcgtctccgccgagctgccgccgcacggcggcggggcaggggagcggttt
gaaggcatcctgccgccggtctcgacggccccgtgcttctcgatccgcaagcccgcgacg
cgggtctacacgcttgccgattatgtcgccgacgggatcatgtcggcggacgtggcgcgg
ctactcagcctcgcggtcgtcgagcggcgcaacatcctcgtcgccggcggcaccagctcg
ggcaagaccacgctcgccaacgcgctgctcgccgagatggcgcatctcgacgagcgcgtg
atcctgatcgaggacacgcgcgagctgcagtcgcctgcggccgataccgtggcgctgcgc
acccgcgccggcgcggtgtcgatgaccgacctcgtgcgctcgacgctcaggctccggccc
gaccgcatcatcgtcggcgaggtgcgtggccccgaggcgctcgacatgctgaaagcctgg
aacaccggccacccgggcggcatcgccaccgtccacgccaacagcgcgctggccgcgctc
tatcgcatcgagcagctcgtccaggaagccgtcttcaccgtgccgcgccggctgatcgcc
gatgccatcgacctcgtcgtcttcatcgccggccgcggcaccgcgcggcgcgtcgaaagc
ctcgcccgcgtcgccgggctcgatcccgacggcggctacgcggtgctcgacctcacctct
ccaaagaacctcatcccaggagcctga

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