Sphingomonas cannabina: LZK98_17150
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Entry
LZK98_17150 CDS
T08607
Name
(GenBank) DEAD/DEAH box helicase
Organism
scab
Sphingomonas cannabina
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Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
UIJ44763
LinkDB
All DBs
Position
complement(3636861..3640532)
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AA seq
1223 aa
AA seq
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MAELEAERRALAEAFLAVHATENALTAQQARLFVRSIQSSWRVTSLDWSVRQSVELFTDA
RRLLHAATIFEEGDGPDGAAAASCYRRAGEILEWLTRAGDDVTHDVPAEVLAAGAYQLAG
LPAMAGGILKRVKLDGVGAILGAFLGCDFDSVMELTAAFWARHGDLTGPDGSEGLLADTD
DEPPQPMPSIALEADEDGDAPPESRTSRVAWYVAVETVRSIGLLADGLRRGELIRTETAL
QKLAALADVATRIVGDEAWIMLKLVRASAARFARDSLHRRAAPLAALSPDAAAKLHRFAR
EQFARGRGVLWPSQVSGLARLAAGRSFALCTPTGSGKTLVANLALVKELLLTAPADGKPS
PLALYIVPSRALAGEVEAKLSAEFRSEITVTGLYGGTDWGITDYWLTADTSTVLIATVEK
AEALIRYVGHLLVRRLELLIIDEAHQVVVDGSPRTMRNLAAHSDRAMRLEGLVTRLLALK
PGIARVALTAVAGGAAPPVARWIEGDDAAEPVGLGYRSSRQLVGVLESRPGQSARITLEL
NNGQPLYVRGREDPVFLNLSLPPMPEPLSAIRNSLPHYVQNHALWTAMNLVPGGRRILIS
VTQAPDRVMKRYAEAFTLKGWDALPPFAPPADGVQLFADARAACVDYCGPASSEVALLDR
GIATSHGQMPQRLRRLMVELIEKRVCPVTVATATLTEGVNLPFDLIILPSLERTVDIRPT
GQPVTDILPTAEFRNLAGRAGRPGAAESMEGMTLVCLPMANSSTAPAEQATQRNQRDGFV
RNLNRLLDAIAAESRADATVSTPLQTLLRSIWQKAHDVLGLRTVADLHAFLEASLPESVG
DNLGVGSTQTLDMLGDSLDELDGFILSAIEEMERLSGAPADVEAAIRDIWSRSFTRYAGV
AEEWLEAAFVKRGEALAARLYPDPVQRRALYQIGFTPYVGRQFQQVSPAILEALRGAADY
GTWGNAERFALVGRLGELVRGGRGFGFTARGATEQALIDRWLDVAGWWVQRDGASPPAAG
ELRRWQGFVANNLEFRLGVSVGAAVAEAWNANAGEAEVPNLAEWRETTKLPWIGFWFREL
LRWGTLDPFVAFAMAQGLGGTREAATVLRAEYETWLASRTLVPTAEERIDPQLFLAWMEA
RPRGIVPPAVPTTVAAGLTRVTGSRASYAVRPIIRDGTVTWIDPAGFEVGTGQAIPGAGA
ARPSGHDYVIANDQFGVRVTRTF
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcttgaggcggaacgccgcgcgctggccgaggccttcctcgcggtccatgct
acggagaacgcgctgaccgcgcagcaggcgcgccttttcgtgcggtcgatccagagcagc
tggcgggtcacgtccctcgactggtcggtcaggcaatcggtcgagcttttcaccgatgcg
cgcaggctgctgcacgcagcgacgatcttcgaggagggtgatggcccggacggcgcggcg
gcggcgtcctgctaccgccgtgcgggcgagatcctggaatggctgacccgcgcgggagac
gacgtcacgcacgacgttcccgccgaggtgctcgccgccggcgcgtatcagctcgcgggt
ctgccggcgatggccggcgggattctgaagcgggtgaagctcgatggcgtcggcgccatc
ctgggcgcgttcctcggttgcgacttcgactccgtgatggagctcaccgccgcgttctgg
gctaggcatggggatctgacggggccggacggatcggaagggcttctcgctgataccgac
gatgagccgccacaaccgatgccgtccatcgcactggaggcggacgaagatggcgacgcg
ccgccggaaagccggacgagccgggtcgcctggtatgtcgccgtcgagacggtgcggtct
atcggtctcctcgcggacgggctgcggcgcggcgagctgatcaggaccgagacggcgttg
cagaagctggcagcattggcggatgtcgcgacgcgcatcgtcggcgacgaggcttggatc
atgctcaagctggtccgcgcttccgctgcccgtttcgcgcgggatagcctgcaccgtcgt
gccgcgccgcttgcggcgctcagcccggatgcggctgcgaagctgcaccggtttgcccgc
gagcagttcgcccgtggtcgtggcgtgctgtggccgtcgcaggtcagcggcctcgcccgt
ctcgcggccggcaggtcattcgcgctctgcaccccgacgggatcgggcaagacgctggtc
gccaacctcgcgctggtgaaggagctgcttctgaccgcaccggcggacggcaagccatcg
ccgctcgcgctctacatcgtcccgtcacgcgcgttggcgggcgaggtcgaggccaagctg
agcgccgaattccgcagcgagatcaccgtcaccggactctacggcggcacagattggggc
atcaccgattactggctgacggccgacacctcgaccgtgctgatcgccacggtggagaag
gccgaggctctcatccgctatgtcgggcaccttctggtccggcgcctcgaactgctgatc
atcgacgaggcgcaccaggtggtcgtcgacggctccccccgcaccatgcgcaatctcgcc
gcccactccgatcgtgcgatgcggctcgaaggcctggtcacccgccttcttgcgctcaag
ccaggcatcgcccgcgtggcgctgaccgccgtcgcgggcggagcggcaccgccggttgcg
cggtggatcgagggcgacgatgcggccgagcccgtggggctcggctaccgcagcagccgt
cagctggtcggcgtgctcgaatcgcgcccgggccagtcggcgcgcatcacgcttgagctg
aacaacggccagccgctttacgttcgcggccgcgaggatcctgttttcctcaacctcagc
cttcccccgatgcccgaaccactgtcggccatacgcaacagtctcccgcactacgtgcag
aaccatgcgctgtggacagccatgaacctggtccccggtggtcgtcgcatcctcatctcg
gtcacgcaggcgcccgaccgcgtgatgaagcgctatgccgaggcgttcacgctcaagggt
tgggacgccctgccgccattcgcgccgccggcggatggcgtgcagcttttcgccgacgcg
cgcgcagcctgcgtcgactattgcggtccggcttcgtccgaggtcgctctgctcgaccgc
ggcatcgcgacgagccatggccagatgccgcagcgtctgcggcgcttgatggtcgagttg
atcgagaagcgcgtctgtccggtgacggtggcgaccgcgaccttgaccgagggggtgaac
cttccgttcgacctcatcatcctgcctagcctggagcggaccgtggacatacggccgacg
ggccagccggtgaccgacatcctgcccacggcggaattccgcaatctagcgggacgcgct
ggccggccgggcgcggcggagtcgatggagggcatgacgctcgtctgcctgccgatggcc
aactcgtcgacggcaccggccgagcaggcgacgcagcgcaatcagcgcgacgggttcgtt
cgcaacctgaaccggctcctcgacgcgatcgcggccgagtcccgcgccgacgccaccgtc
agcacgccgctccagacgctgctacgttcgatctggcagaaggcgcacgacgtgctgggg
ttacgcacggtcgccgacctgcacgcgttcctcgaggcatccctgccggaatcggtcggc
gacaacctcggcgtcggatcgacgcagactctggacatgctaggcgacagtctcgacgaa
ctcgacggcttcatcctgtcggcgatcgaggagatggaacgcctgtctggagcgccggcg
gacgtcgaagcggcgatacgcgacatctggagccggtccttcacccgatacgccggcgtc
gcggaggaatggctagaggcagccttcgtgaagcgcggcgaagcgctagccgcacggctg
tatcccgatcccgtccagcgacgcgcgctctaccagatcggcttcacgccctacgtcggg
cggcagttccagcaggtgtcgcccgccatcctggaagcgcttcgtggtgcagccgactac
ggcacatggggcaacgcggaacggttcgcgctcgtcgggcggctgggcgaactcgtgcgg
ggcggtaggggcttcggcttcacggcgcgtggagcgaccgagcaggcgctgatcgaccgg
tggctggatgtcgctggatggtgggtgcagcgtgacggtgcgtcgccgccggcggccggc
gagctccgccgctggcagggcttcgtggccaacaacctggagttccggctcggcgtctct
gtcggcgcggcggtcgcggaggcatggaacgccaacgccggcgaagccgaagtccccaac
ctcgcggaatggcgcgagaccacgaagctgccgtggatcggtttctggttccgcgagctg
ctgcgctggggcacgctcgatccgttcgtcgcgttcgccatggcgcaggggttgggcggg
acgcgcgaggccgcgaccgtgctgcgtgctgaatacgagacctggctcgcgagccgcacg
ttggtccccacggccgaggagcggatagatccgcagctcttcctcgcctggatggaggcg
cggccgcgggggatcgtcccgccggcggtgccgacgacggtggccgcgggtctgacgagg
gtgaccggttctcgcgcctcgtatgccgttcgcccgatcattcgcgacggcaccgtgacg
tggatagatcccgctggtttcgaggttgggaccgggcaggcgatcccgggcgccggcgcc
gcgcggccatccgggcacgactatgtaatcgcgaatgatcagttcggcgtgcgggttacg
cggaccttctga
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