Sphingomonas cannabina: LZK98_17750
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Entry
LZK98_17750 CDS
T08607
Name
(GenBank) DEAD/DEAH box helicase
Organism
scab
Sphingomonas cannabina
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UIJ44873
LinkDB
All DBs
Position
complement(3790191..3793283)
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AA seq
1030 aa
AA seq
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MSAPKPFQAAAVDAALSAFANQGGRRRFLVADEVGLGKTIVAKEVARRMSEDGERPLVIY
YIANGHAVSHQNKGRVVSFLDEPERKAAVATPDRLSLIAVSKRPDKPVLIYALTPATSFP
GARARLTGGRKEERAFLKVLLDRAYPAFARDLDPAIMRLSVGDSWDWLVEDAERKFAAAP
PHLTRRFREALAAEFGEPVRERLEQALYGDEERKIKPLKPTTFVGHLRRALALATLRHQA
PDLVILDEFQRYRQLLDEKDADPLLKALLEPHGSVARPAILLLSATPYRLLSTRWEEAQG
ALAHAELLELIEFLAGSDVRDRAKSLFSDFGDKLRDIAVHAEATDPRLEIEINEAAGLRD
ALRALLTPVMSRTERDSVASGDPLAGTQFLAAEPIAEDFQIYRHLADSFPEDVRYEALPY
WSSVPLPAQSLGPRYAAWKRATIKAAPKLTKMTRERRNKLDAPARWPDAKLRALSAAAPA
KLLSLPWVAPSLPWWPLAGGWKGKVADPKLLMFSRFRATPPSVAALLSFGVEASCLPQQR
GGYEKAYRRRRFKLAAVPGPVMAAFHPSPWLIRHTDPLAKAGETVGAIRKQVRRQILAAL
PKGIIGKDTVKARRRHRSIGRTLAAIERAAGLSEQSAAAWSGAVGEDRGARSAVLKWRQT
PTIERLSPAELDDLVDYAIGAPGVVLGRALLRHDPTILDPARYGELVQLSWQGLRAYLDN
PVILSSLPGKNAVDQVMGAVVDGGFESVLDEHFWLRAQNLPEGAAGLAKDLQSSLGLRAG
NFSFHSVGGPAHKIPVRSHVAVPFGDAEAEPAGKVNGALASSAPARPDEVRRSFNTPFWP
HVLATTSVGQEGLDFHPWCSHVVHWDLSSNPLDLEQREGRVQRYAGLAVRRRLSNMLGEE
ALGHAVVSGGSAWHHLQRQAEKLVDVSGLRPWWVLENAEISRHVFERPFGRDMSRFAQLR
EQRMIYRLALGQPNQEDFIEILARGGEATRMLLSPLVLDLSAMGLRQAPEPATPDCRGAS
RFPLPLEEGG
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcccccaagccgttccaggcagcggccgtcgatgccgcgctatccgcctttgcg
aatcaaggcgggcgccgacgctttctcgtggccgatgaagtcggtctgggaaagaccatc
gtcgcgaaggaagtcgcgcgccgtatgtcggaagacggtgagcggcctctcgttatctat
tacatcgccaacggccatgcggtctcccatcagaacaaggggcgcgtcgtcagcttccta
gacgagccggaacgtaaggcggccgttgcgacgccggatcgcctttccctcatcgccgtc
tcgaagcggcccgacaagccggttctgatctatgctctgacgccggcaacgtccttcccc
ggcgcgcgtgctcgtctgaccggcggaagaaaagaagagcgggcatttctcaaggtgctg
ctcgaccgggcttacccggcgttcgctcgcgatctcgatccggccataatgcgcctgagc
gttggcgattcctgggattggctggtcgaggatgccgagaggaaattcgccgcggcgcca
ccgcatctgacacggcgttttcgcgaggcgctggcggctgaatttggagagcccgtgcgc
gaaaggctcgagcaagctctgtatggtgacgaggagcggaagataaagccgctcaaaccg
accaccttcgtcggtcatcttcgtcgggcactggcgctggcgaccctacgtcatcaggcg
cccgatttggtcattctggatgagtttcagcgttacaggcagctattggacgaaaaggac
gccgacccgctcctcaaggccctgctggagccgcacgggtcagtggctcggccagcgatc
ctgctgctcagcgcgacaccctaccggctgctcagtacccgatgggaggaagcccagggc
gcactcgcgcacgccgagttgctggagttgatcgagttcctcgccggctccgatgtccgt
gaccgcgcaaagtctctgttttctgatttcggcgacaagttgcgggacatcgcggtgcat
gcggaggcgaccgatccccgcctggagatcgagatcaacgaggctgccggactcagagat
gctcttcgcgcactgctgacaccggtcatgtccaggacagagcgggacagcgtcgcctcg
ggcgatccgttggctggaacgcaattccttgcggcggagccgatagctgaagacttccaa
atctatcggcatctggcggatagctttcctgaagacgtgcgatacgaagcgctgccctat
tggtcgtccgtcccactgccggcccaatccctggggcctcggtacgcggcttggaagcgc
gcaaccatcaaggccgcgccgaagctcacgaagatgacacgggagcgccgcaacaagctg
gatgcgccagcgaggtggcctgacgccaaactcagggcactcagcgccgcagcgccggcg
aaacttctatccctgccgtgggtagcgccatccctaccatggtggccgcttgccggcggc
tggaagggtaaagtcgccgacccgaagctgctgatgttcagccggtttcgggcgactccg
ccgagcgtggcggcgctcctgagtttcggcgtcgaagcgtcatgccttccccagcaacgc
ggtggctacgagaaagcctatcggcggcgtcgcttcaaactggcggccgttcccggaccg
gtcatggccgcctttcatccgtctccatggctcatccggcatacggatccgctcgcgaag
gcgggagagacggtcggtgctatccgcaagcaggtgagacggcagattctcgcggcgctt
cccaaggggatcatcgggaaggacacggtgaaggcccgtcgacggcaccgatccatcggc
cggaccttagccgcgatagagcgggcggccgggctgtcggaacaatctgccgccgcctgg
agcggcgccgtcggtgaagatcgcggcgcccggtccgctgtccttaaatggcgacaaacg
ccgacgatcgagcgcctctcgccagccgaactcgacgatctcgtcgactatgccatcggc
gcgccgggcgtggtgctcggtcgggcgctattgcgccatgacccgacaatccttgatccg
gcgcgttatggtgaactcgtacaattgagctggcagggcttgcgcgcgtatctcgacaat
ccggtgatcctgtcgtccctgccgggcaagaacgcggtcgatcaggtgatgggcgccgtc
gtcgatggcggtttcgaaagtgtcctcgacgagcatttctggcttcgtgcgcagaatctt
ccagagggcgcagcgggcctcgccaaggatttgcaatcttcgctcggcctgcgggcgggt
aattttagctttcacagtgttggcgggccagcacacaagataccggtacgatcccatgtc
gctgttccgttcggcgacgccgaggcggaaccggccggcaaggtgaatggagcactcgcg
tcatccgcgccagcgcggccggacgaagttcgccgaagcttcaacacgccgttctggccg
cacgtgctggcaacgacgtcggtggggcaggaaggtctggattttcatccctggtgttcg
catgtcgtccattgggatttgtcctccaacccgctcgaccttgagcagcgcgaaggtcgc
gttcagcgctatgctgggctggcggtgaggcggcgactttcgaatatgttgggcgaagaa
gctcttggacacgcggttgtgtcgggcggctctgcttggcatcacctgcagcgccaggcg
gagaagctggttgatgtgagcggccttcgaccttggtgggtgcttgagaacgctgagatc
agccgccacgtcttcgaacgtccatttggccgggacatgagccgcttcgcccaacttcgc
gagcagcgcatgatctaccgactggcgttgggccagcccaaccaggaggacttcatcgag
attcttgcgcgcggcggcgaggcgacccgcatgctgctgagcccgcttgtgctggatctc
tccgctatggggctacgtcaggcgcccgaaccggccaccccagattgtcgcggtgcctca
cggttcccccttcccttggaggaagggggatga
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