Sphingomonas cannabina: LZK98_17905
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Entry
LZK98_17905 CDS
T08607
Name
(GenBank) conjugal transfer protein TraG
Organism
scab
Sphingomonas cannabina
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UIJ44901
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All DBs
Position
3816764..3818749
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AA seq
661 aa
AA seq
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MSATKILWGQILTVFLIVLMTTWGATQWTAYRFGFQPQLGQPWFELAGWPIYYPPAFFWW
WYFYDAYAPPIFVEGAYIAASGGFISIAVAIGMSVWRAREAKNVETYGSARWARPEEVKA
AGLLGPDGVVLGKLERDYLRHDGPEHVLCFAPTRSGKGVGLVVPSLLTWPGSAIVHDIKG
ENWTLTAGYRARHGLVLLFDPTNAKSAAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLE
KRNHWEKTSHALLVGAILHVLYAEADKTLAGVAAFLSDPKRPIESTLAAMMKTAHLGEAG
PHPVIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRIADMVGGKHPT
TLYLVVPPSDINRTKPLIRLILNQVGRRLTEDLQAKGNRHRLLLMLDEFPALGRLDFFES
ALAFMAGYGLKAFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTA
TEMKAMKNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPSEEIVMVAGIPPIRAKK
ARYYEDRRFQERILTPPGLTKPASARADDWSTLALPERPVLNTPIAVDDGADDDPTDSER
RHQPELSRTKTVERKPVIENEFEIDPRDDLEEDAARLSRMTQTMRQVARQASLDPGDGID
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgacgaaaatcctctggggccagatcctcaccgtcttcctgatcgtgctgatg
acgacctggggcgcgacgcaatggacggcctaccggttcggcttccagccacagctcggg
cagccctggttcgagcttgccgggtggccgatctactatccgccggccttcttctggtgg
tggtacttctacgacgcctatgcgccgccgatcttcgtcgagggtgcctacattgccgca
tccggcgggttcatctccatcgcggttgccattggcatgtccgtgtggcgggcacgcgaa
gcgaagaacgtcgagacctacggctcggcccgctgggcgcggccggaagaggttaaggcc
gcaggcttgctcggcccggacggcgtcgtgctcggcaagcttgaacgcgactatcttcgc
catgacggtccggagcatgtgctgtgcttcgcgccgacacgttccggcaagggcgtgggc
ctggttgtgccctcgctcttgacctggccgggctcggcgatcgttcacgatatcaagggc
gagaactggacgctgaccgccggctaccgcgcccggcacggcctcgtgctactgttcgat
ccgaccaatgccaagtcggcggcctacaatccgctgctcgaggtgcggcgcggcgagtgg
gaagtccgcgacgtgcagaacatcgctgacatcttggtggacccggaaggctcgctcgag
aagcggaaccactgggagaagacgtcgcacgcgctgctggtgggtgcgatcctccacgtg
ctctatgccgaggccgacaagacgctcgccggcgtcgccgctttcctgtccgatccgaag
cgtccgatcgagtcgaccctcgcggcgatgatgaagaccgcccacctcggcgaggccgga
cctcaccctgtgatcgcgtcggctgcgcgcgagctgctcaacaaatctgacaacgaacgc
tccggcgtactgtcgaccgcgatgtcgttcctgggtctgtatcgcgatcccgtcgtcgcc
gaggtcacgcgtcgctgcgactggcgcatcgccgacatggtcggtggcaagcatccgacc
accctctacctcgtggtcccgccctccgacatcaaccggaccaagccgctgatccgcctg
atcctcaatcaggttggccggcgcttgaccgaggatctgcaggcgaagggcaaccgccat
cggctgctgctcatgctcgacgagtttcccgcgctcggccgcctcgacttcttcgagagc
gccttggcgttcatggcgggttacggcctgaaagcattcctcatcgcccagtcgctgaat
cagatcgagaaggcctatggcccgaacaactcgatcctcgacaactgccacgtccgggtc
agcttcgcgaccaatgacgagcggaccgccaaacgcgtttcggatgcgctcggcaccgcc
accgagatgaaggcgatgaagaactatgccggccaccgcctctcgccctggctcggccac
ttgatggtgtctcgctcggagaccgcccgccaattgctgacgcctggcgagatcatgcag
ctcccgccctccgaggaaatcgtcatggtcgccggcattccgccgatacgcgcgaagaaa
gcccgctactatgaggatcgccgatttcaggagcgcatcctgacgccgcccggcctgacc
aaaccggcaagcgcaagggcagacgattggagcacgctggctttgcccgaacggccggtg
ctgaacacgcccatcgccgtggatgatggggccgatgacgatccgacggattccgagcga
cggcatcagcccgaactgagccgcaccaagaccgtcgagcgaaagccggtcatcgaaaac
gagttcgagatcgatccccgtgatgacctcgaggaggatgccgcccgccttagccgcatg
acgcagaccatgcgccaggtcgctcgccaagcctcgctcgatccgggcgacggcatcgat
ttatag
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