Sphingomonas cannabina: LZK98_18405
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Entry
LZK98_18405 CDS
T08607
Symbol
scpA
Name
(GenBank) methylmalonyl-CoA mutase
KO
K01847
methylmalonyl-CoA mutase [EC:
5.4.99.2
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00280
Valine, leucine and isoleucine degradation
scab00630
Glyoxylate and dicarboxylate metabolism
scab00640
Propanoate metabolism
scab00720
Other carbon fixation pathways
scab01100
Metabolic pathways
scab01120
Microbial metabolism in diverse environments
scab01200
Carbon metabolism
scab04980
Cobalamin transport and metabolism
Module
scab_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LZK98_18405 (scpA)
00640 Propanoate metabolism
LZK98_18405 (scpA)
09102 Energy metabolism
00720 Other carbon fixation pathways
LZK98_18405 (scpA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LZK98_18405 (scpA)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
LZK98_18405 (scpA)
Enzymes [BR:
scab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
LZK98_18405 (scpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
B12-binding
IMPDH
PhnI
Motif
Other DBs
NCBI-ProteinID:
UIJ45000
LinkDB
All DBs
Position
complement(3905730..3907868)
Genome browser
AA seq
712 aa
AA seq
DB search
MSKPTPADWQALAEKEVKGRDLVWHTPEGIAVKPLYTAEDTAELDPGLPGFAPFTRGVRA
SMYAGRPWTIRQYAGFSTAEESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVVGDV
GKAGVAIDTVEDMKILFDGIPLGEMSVSMTMNGAVIPILAFFIVAGEEQGVPQAKLDGTI
QNDILKEFMVRNTYIYPPAPSMRIVSDIIAYTSAHMPKFNSISISGYHMQEAGATQVQEL
AFTIADGKEYAKAAMAAGLDIDAFAGRLSFFFAIGMNFFMEVAKLRAARTLWHRVMTDLG
AKDERSKMLRTHCQTSGVSLQEQDPYNNVIRTTIEAMAAVLGGTQSLHTNALDEAIALPT
DFSARIARNTQLVIQEESGITKVVDPLGGSYYIEALTNELVERASEIIARVDAEGGMARA
VAAGWPKAMIEEAAAARQARIDRGEEVIVGVNKYRPAEDEEIEILAIDNHAVRDAQIARI
AKVRAARDEAACQAALGRLREGAGGSDNLLALAVEAARARATLGEISAAMEAGFGRYETV
PTPVSGIYREAWRDDARWSRLTDGVGATERRLGRKPRMLVAKMGQDGHDRGANLVSSMFG
DLGFEVVPGPLFQTPDEAAKLAIEKEVDVVGASSLAAGHLTLIPELIGHLKDAGRADIKV
VAGGVIPQQDYQALRDAGVQAIFGPGTNLIAAAEEVLRLLGHNWAPESEAAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacccacccccgccgactggcaggcgctcgccgagaaggaggtgaagggccgc
gacctcgtctggcacacgccggaggggatcgcggtcaagccgctctacaccgccgaggat
acggcagagctcgaccccggccttcccggcttcgcgcccttcacccgcggcgtgcgcgcg
tcgatgtacgccggccgtccctggacgatccgccaatacgccggcttctccaccgccgag
gaatccaacgccttctaccgccgcaacctcgccgccgggcagaaggggctgtcggtcgcc
ttcgatctcgccacccaccgcggctacgacagcgatcacccgcgtgtggtcggcgacgtc
ggcaaggcgggcgtcgcgatcgacaccgtcgaggacatgaagatcctgttcgacggcatc
cccttgggcgagatgtcggtgtcgatgacgatgaacggcgcggtgatcccgatcctcgcc
ttcttcatcgtcgccggcgaggagcagggcgtgccgcaggcgaagctggacggcacgatc
cagaacgacatcctcaaggagttcatggtccgcaacacctacatttatccgccggcgccg
agcatgcggatcgtgtcggacatcatcgcctacacctcggcccacatgccgaagttcaac
tcgatctcgatctccggctatcacatgcaggaggcaggggcgacgcaggtgcaggagctc
gccttcaccatcgccgacggcaaggaatatgcgaaggccgcgatggcggcggggctcgac
atcgacgccttcgccgggcggctcagcttcttcttcgcgatcggcatgaacttcttcatg
gaggtagcgaagctgcgcgcggcgcgaacgctgtggcaccgcgtgatgaccgacctgggc
gccaaggacgagcgctcgaagatgctgcggacgcattgccagacgtcgggcgtgtcgctg
caggagcaggacccctacaacaacgtcatccgcaccacgatcgaggcgatggcggcggtg
ctcggcggcacccagagcctccacaccaacgccctcgacgaggcgatcgcgctgccgacc
gacttctccgcgcgcatcgcccgcaacacccagctggtgatccaggaggagagcgggatc
accaaggtcgtcgatccgctgggcggctcctattacatcgaggcgctgacgaatgagctg
gtcgagcgggcatcggagatcatcgcgcgcgtcgacgccgagggcggcatggcccgcgcg
gtcgcggccggctggcccaaggcgatgatcgaggaagccgccgccgcccgccaggcgcgg
atcgaccgcggcgaggaagtgatcgtcggcgtcaacaaataccgcccggccgaggacgag
gagatcgagatcctcgcgatcgacaaccatgcggtgcgcgacgcccagatcgcgcgcatc
gccaaggtccgcgcagcgcgcgacgaggcagcctgccaggcggcgctcggccggctgcgc
gagggggcaggcggcagcgacaacctcctcgcgctcgcggtcgaggcggcacgagcccgc
gcgacgctgggcgagatcagcgcggcgatggaggcgggcttcggccgctacgagacggtg
ccgacgccggtctccggcatctaccgcgaggcgtggcgcgacgacgcgcgctggagccgc
ctcaccgacggcgtcggcgcgaccgagcgccggcttggccgcaagccccggatgctggtc
gccaagatggggcaggacgggcatgaccgcggcgccaacctcgtgtcgtcgatgttcggc
gacctcgggttcgaggtggtgcctggcccgctgttccagacgcctgacgaggcggcgaag
ctggcgatcgaaaaggaggtcgacgtggtcggcgcctccagccttgccgccgggcacctg
acgctgatcccggagctgatcggccatctcaaggacgccggccgcgccgacatcaaggtg
gtggcgggtggcgtaatcccgcagcaggattatcaggcgctgcgcgacgcgggcgtgcag
gcgatcttcggtcccggcaccaacctgattgccgccgccgaggaggtgctgcgcctgctc
ggccacaactgggcaccagagagcgaggctgctgaatga
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