Sphingomonas cannabina: LZK98_18520
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Entry
LZK98_18520 CDS
T08607
Name
(GenBank) DEAD/DEAH box helicase
Organism
scab
Sphingomonas cannabina
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Beta-lactamase2
PG_binding_2
Helicase_C_4
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
UIJ45018
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Position
3926360..3927700
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AA seq
446 aa
AA seq
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MSFADLGLSDELLRAVTESGYTEPTPIQASAIPSVLMMRDLIGIAQTGTGKTASFVLPMI
DILAQGRSRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMALLIGGVSMGDQVKALE
KGVDVLIATPGRLMDLFGRGNILLTGCDLLVIDEADRMLDMGFIPDIEEICTKLPKTRQT
LLFSATMPPPIKKLADKFLSNPKTIEVARPATTNTNITQKLVQTTTMKKRDTLRALIDRD
NVSTAIVFCNRKTTVRELNKSLKRHGYRSGEIHGDMEQPQRLAELELFKRGEINILVASD
VAARGLDIKGVSHVFNFDAPWHPDDYVHRIGRTGRAGATGTAYTLVTSEDAENIENIEKL
TGQTIPRETVETEDREKPKRVRRGEKAAGEAEAPRERKPRREAEPTAPAREAKRPRRDDR
RQSRDDGPDEGWNGPVPAFLEVKLGA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgccgatctcggcctttcagacgaattgctgcgcgcggtgacggagtccggc
tacaccgagccgactccgatccaggcgagcgccatccccagcgtgctgatgatgcgcgac
ctgatcggcatcgcccagaccggcaccggcaagaccgccagcttcgtgctgccgatgatc
gacatcctggcgcagggtaggtctcgcgcgcggatgccgcgctcgctgatcctcgagccg
acgcgcgagctcgccgcgcaggtggccgagaatttcgagaaatacggcaagtaccacaag
ctctcgatggcgttgctgatcggcggcgtgtcgatgggcgaccaggtgaaggcgctggag
aagggcgtcgacgtgctgatcgcgacgccggggcggctgatggacctgttcgggcgcggc
aacatcctgctgaccggctgcgacctgctggtgatcgacgaggccgaccggatgctcgac
atggggttcatccccgacatcgaggaaatctgcaccaagctgcccaagacccggcagacc
ttgctgttctcggcgacgatgccgccgccgatcaagaagctggccgacaagttcctgtcg
aaccccaagacgatcgaggtcgcgcggccggcgacgaccaacaccaacatcacgcagaag
ctggtccagaccacgacgatgaagaagcgcgacacgctgcgcgcgctcatcgaccgcgac
aatgtttcgaccgcgatcgtcttctgcaaccgcaagaccacggtgcgcgagctcaacaag
agcctgaagcgtcacggctaccgctccggcgagatccacggcgacatggagcagccgcag
cgcctggccgagctcgagctgttcaagcgcggcgagatcaacatcctcgtcgcctccgac
gtcgccgcgcgcgggctcgacatcaagggggtcagccacgtcttcaacttcgacgcgccc
tggcatcccgacgactatgtccaccgcatcggccgcaccggccgcgcgggcgcgaccggc
accgcctatacgctggtgacgtccgaggacgccgagaacatcgagaacatcgagaagctc
accggccagaccatcccgcgcgagacggtcgaaaccgaagaccgcgagaaacccaagcgg
gtccggcgcggcgagaaggcagccggcgaggctgaggcgccgcgtgagcgcaaaccgcgg
cgcgaggcagagcctaccgctccggcgcgcgaggcgaagcggccgcgccgcgacgaccgc
cgccagagccgcgacgacgggccggacgagggctggaacggtccggtgccggcgttcctc
gaggtcaagctcggggcgtag
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