Sphingomonas cannabina: LZK98_18970
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Entry
LZK98_18970 CDS
T08607
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scab03009
]
LZK98_18970 (rsmI)
Enzymes [BR:
scab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
LZK98_18970 (rsmI)
Ribosome biogenesis [BR:
scab03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LZK98_18970 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
HTH_8
PhageMin_Tail
Motif
Other DBs
NCBI-ProteinID:
UIJ45102
LinkDB
All DBs
Position
4026295..4027131
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AA seq
278 aa
AA seq
DB search
MNAELSPGLYIVATPIGNLGDLSPRAAEVLKGADVIAVEDSRVTAKLLNHLGIKRPMTPY
HDHNAEAVRPGLVARMAAETVVLVSDAGTPLISDPGYKLVRDARAAGHPVTTIPGPCAAI
AALTLAGLPTDRFLFLGFLPAKAGARATAIAEVAGVRATLILYESGPRLAATLAALAEGL
GDREAGVAREITKRFEECVTGTLGELAARYADAPPKGEIVVIVAPPGERAPASEEDADAA
LKEALARLPASKAAAEVAKRLGLDRRALYARAMELKDA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgaactctcccccggcctctacatcgtcgcgaccccgatcggcaatctcggc
gacctctccccgcgcgccgcggaggtgctgaaaggcgccgacgtgatcgcggtcgaggac
agcagggtcaccgccaagctgttgaatcacctcggcatcaagcggccgatgacgccgtac
cacgaccataatgccgaagcggtacgccccggcctggtggcgcggatggcggcagagacg
gtggtgctggtgtcggacgcggggacgccgctgatctccgacccaggctacaagctggtg
cgcgacgcgcgcgcggcaggacatccggtgacgacgatccccggcccctgcgcggcgatc
gcggcgctgacgctggcggggctgccgaccgaccggttcctgttcctcggcttcctcccc
gcgaaggccggcgcccgcgcgacggcgatcgcggaggtggccggcgtgcgggcgacgctc
atcctgtacgagagcggcccgcggctggcggcgacgctggccgcgctggcggaagggctc
ggcgaccgcgaggccggggtcgcgcgcgagatcaccaagcgattcgaggaatgcgtgacc
gggacgctcggcgagctggcagcacgctatgccgatgcgccgccgaagggcgagatcgtg
gtcatcgtcgccccgcccggcgagcgggcgccggcgagcgaagaggatgcagacgcggcg
ctcaaggaagcgctggcacgcctgcccgcctccaaggcggcagcggaagtggcgaagcgg
ctggggctcgaccggcgcgcgctctacgcgcgggcgatggaactcaaggatgcgtga
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