Sphingomonas cannabina: LZK98_19020
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Entry
LZK98_19020 CDS
T08607
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
scab
Sphingomonas cannabina
Pathway
scab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LZK98_19020 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scab03400
]
LZK98_19020 (mutS)
DNA repair and recombination proteins [BR:
scab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LZK98_19020 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UIJ47470
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Position
4036960..4039527
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AA seq
855 aa
AA seq
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MMAQYLALKAEAEDCLLFYRMGDFFELFFEDAKIASAVLDIALTARGEHGGAPIPMCGVP
AHAMEGYLARLIKAGHRVAIANQTETPEEARKARGSKALVGRSIIRVVTAGTLTEEALLD
SRTANWCAAVGEAGGAIAIAAADVSTGRFEVIETNAGSLGAELARLSPAEVVAADGGFAD
ATVFRPRGDFDSARGEERLKALFGVATLDGYGAMSRAALAAAGGLVAYLEHTARGALPFL
RPPRIVRSEAAMAIDAATRESLELTISAAGTRAGSLLDAVDRTVTGAGARLLGQDLSAPL
MDKAAIEARLALVQRFHDDAALRERIRAALRALPDIGRALGRLAAGRGSPRDLGQLRDGL
DGAWRLGEMLGQFHEPALLVELAPQLQGHGALIDLLTRALVPSPPIDAANGGYIAEGYDA
ALDDLRDAGAGGRRAIAALEAQYRDQTGIASLKIRHNGVLGYHIEVPAKAADPLMRPDSG
FTHRQTLAGVVRFNAPELHEVAIKVAHAGAHALAAEAAHLEELTQQALANREPIARTADA
LARLDVAAGLAERAAEGGWALPALVDHACFEVEGGRHPVVEAAVAKAGGRFVANDCMLSE
GNRLWLVTGPNMGGKSTFLRQNALIAVLAQAGSYVPATRATLGLVDRLFSRVGASDNLAR
GRSTFMVEMVETAAILAQATARSFVILDEVGRGTSTYDGLAIAWAVVEAIHEDNRCRCLF
ATHYHELTRLAERCDALTLHNVRAREWKGDLVLLHEVAEGPADRSYGLAVARLAGLPPAT
IKRAKAVLDKLEAGREKTGGLAAGLDDLPLFAAAAEAEEEAVDALRAELDGLDIDALSPR
EALEVLYRLKSMASE
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccaatatctcgcgctcaaagccgaggctgaggattgcctgctgttctaccgg
atgggcgacttcttcgagctgttcttcgaggatgccaagatcgccagcgccgtgctcgat
atcgccctcaccgcacgcggcgagcatggcggcgcgccgatcccgatgtgcggtgtgccc
gcgcatgcgatggagggctatctcgcccgcctgatcaaggccggccaccgcgtcgccatc
gccaaccagaccgagacgccggaagaggcccgcaaggcgcgtggctccaaggcgctggtc
ggccgctcgatcatccgcgtggtgacggcgggcacgctgaccgaggaagcgctgctcgat
tcgcgcaccgccaactggtgcgcggcagtgggcgaggctggcggcgcgatcgccatcgct
gccgcggacgtatcgaccggccggttcgaggtgatcgagacgaacgccggcagcctcggc
gccgagctcgcccggctgagcccggccgaggtagtcgcggccgacggtggcttcgccgac
gcgaccgtgttccgccctcgcggcgatttcgacagtgcgcgcggcgaggagcggctcaag
gccctgttcggcgtcgcgacgctcgacggctatggcgcgatgtcgcgcgcggcgctggct
gcggcggggggcctggtcgcctatctcgagcataccgcgcgcggcgccctccccttcctc
cgcccgccgcgcatcgtccgctccgaagcggcgatggcgatcgacgccgccacccgcgag
agtctggagctgacgatcagcgccgccggcacccgcgccggatcgctgctcgacgcggtc
gaccgcaccgtcaccggcgccggcgcgcgcctgctcgggcaggacctgtccgcaccgctg
atggacaaggcggcgatcgaggcccgccttgccctcgtccagcgcttccacgacgacgcg
gccctgcgcgagcgcatccgcgccgcactccgggccctccccgacatcggccgcgccctc
ggtcgcctcgccgccgggcgcggctccccgcgcgacctggggcagctgcgcgacggcctc
gacggcgcgtggcgtctcggcgagatgctcggccagttccatgagccggcgctgctggtc
gagctcgcacctcagctccagggccatggcgcgctcatcgacctcctcacccgcgcgctc
gttccgtcgccgccgatcgacgccgcgaacggcggctatatcgccgagggctatgacgcc
gcgctcgacgacttgcgcgacgccggcgccggcggccgccgtgcgatcgccgcgctggag
gcgcagtatcgcgatcagaccggcatcgcttcgctcaagatccgccacaacggtgtgctc
ggctatcatatcgaggtgccggccaaggccgccgatccgctgatgcggcccgacagcggt
ttcacccaccgccagacgctcgccggcgtggtccgcttcaacgcacccgagctgcatgag
gtagcgatcaaggtcgcccatgccggcgcgcacgctctcgccgccgaggccgcgcatctc
gaggagctgacccaacaggcgctcgccaatcgcgagccgatcgcccgcaccgccgacgcg
ctcgcccgcctcgacgtcgccgccggcctcgccgaacgggcggcggagggcggctgggca
ctgcccgcgctcgtcgaccacgcctgtttcgaggtcgagggcggccgccatcccgtggtc
gaggcggcggtggcgaaagcgggcggccgcttcgtcgccaacgactgcatgttatccgag
ggcaaccgtctgtggctggtcaccggccccaacatgggcggcaagtcgaccttcctgcgc
cagaacgcgctgatcgcggtactggcgcaggccggcagctacgtgcccgcgacgcgcgcg
acgctggggctcgtcgatcgcctgttcagccgcgtcggcgcgtcggacaatctcgcgcgc
ggccgctcgaccttcatggtcgagatggtcgagaccgccgcgatcctggcacaggcgaca
gcgcgcagcttcgtcatcctcgacgaggtcggccgcggcacctccacctacgacggcttg
gcgatcgcctgggcggtggtcgaggcgatccacgaggacaaccgctgccgctgcctgttc
gcgacgcattaccacgagctgacgcgcctcgccgagcgctgcgacgcgctcaccctccac
aatgtccgcgcgcgcgagtggaagggcgacctcgtcctgctccacgaggtggcggagggt
cccgccgaccgcagctacggtctcgccgtcgcccgcctcgccggcctgccgcctgcgacg
atcaagcgcgccaaggcggtgctcgacaagctcgaggccggccgcgagaagaccggcggt
ctcgccgcgggactcgacgacctgccgctgttcgccgcggccgccgaagcggaggaggag
gcggtcgatgcgctccgcgcggagctcgacggcctcgacatcgacgcgctcagcccgcgc
gaggcactggaggtgctgtaccggctgaaatcaatggccagcgagtaa
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