Sphingomonas cannabina: LZK98_19090
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Entry
LZK98_19090 CDS
T08607
Name
(GenBank) fumarate hydratase
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00020
Citrate cycle (TCA cycle)
scab00620
Pyruvate metabolism
scab00720
Other carbon fixation pathways
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01120
Microbial metabolism in diverse environments
scab01200
Carbon metabolism
Module
scab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scab_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LZK98_19090
00620 Pyruvate metabolism
LZK98_19090
09102 Energy metabolism
00720 Other carbon fixation pathways
LZK98_19090
Enzymes [BR:
scab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
LZK98_19090
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
UIJ45124
LinkDB
All DBs
Position
complement(4050655..4052175)
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AA seq
506 aa
AA seq
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MTVTIKPADLIESVADALQFISYYHPMDYIRALGAAYEAEQSPAAKDAIAQILTNSRMCA
EGHRPICQDTGIVTVFVKWGQDCRLDGDRSLQEVIDEGVRRAYLHPENKLRASILADPAF
TRRNTRDNTPSVLHVEMVPGAKVSVDVAAKGGGSENKSKFKMMNPSDSIVDWVLETVPQM
GAGWCPPGMLGIGIGGTAEKAMLLAKESLMGAIDMSQLKARGAQNDIEALRIELYDKVNA
LGIGAQGLGGLSTILDVKILDWPTHAASKPVAMIPNCAATRHAHFVLDGSGPAYLEAPKL
DEWPKVDWAPDSAAKRVDLGTLAPEVVKGWKQGDRLLLSGKMLTGRDAAHKRIKDMLDRG
EALPVEFRGRVIYYVGPVDPVGEEVVGPAGPTTATRMDKFTRMMLEQGLLAMVGKAERGP
AAVEAIRDHQSAYLMAVGGAAYLVARAIKGSKVVGFEDLGMEAIYEFEVQDFPVTVAVDS
TGANVHQLAPLVWRERIAKEKLLEKA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaccatcaagcccgccgacctgatcgagagcgtcgccgacgcgctccagttc
atcagctactaccacccgatggattacatccgcgcgctgggcgcggcctatgaggccgaa
cagtcgcccgccgccaaggatgcgatcgcgcagatcctgaccaactcgcggatgtgcgcc
gaggggcatcggccgatttgccaggacaccggcatcgtcaccgtgttcgtgaaatggggg
caggactgccggctggacggcgaccggagcctgcaggaggtgatcgacgaaggcgtgcgg
cgcgcctacctccatcccgagaacaagctgcgcgcctcgatcctcgccgatccggccttc
acccgccgcaacacgcgcgacaacacgccgtcggtgctccacgtcgagatggtgccgggc
gcgaaggtgtcggtcgacgtcgcggccaagggcggcggcagcgagaacaagtccaagttc
aagatgatgaacccgtcggattcgatcgtcgactgggtgctggagacggtgccgcagatg
ggcgccggctggtgcccgccggggatgctcggcatcggcatcggcgggacggccgagaag
gcgatgctgctcgccaaggaaagcctgatgggcgcgatcgacatgagccagctcaaggcg
cgcggggcccagaacgatatcgaggcgctcaggatcgagctctatgacaaggtcaacgcg
ctcggcatcggcgcgcaggggctgggtgggctttcgaccatcctcgacgtcaagatcctc
gactggccgacccatgccgcgtcgaagccggtggcgatgatccccaattgcgccgccacc
cgccatgcgcatttcgtgctcgacggatcggggccggcctatctggaagcgccgaagctc
gacgaatggcccaaggtcgactgggcaccggacagcgcggccaagcgggtcgacctcggc
acgctggcgccggaggtggtgaagggctggaagcagggcgaccggctgctcctgagcggc
aagatgctgaccgggcgcgacgcggcgcacaagcggatcaaggacatgctcgatcgcggc
gaggcgctgccggtcgagttccgcggccgcgtgatctattacgtcggcccggtcgatccg
gtcggtgaggaagtggtgggcccggccggcccaaccaccgcgacgcgcatggacaagttc
acccgcatgatgctggagcagggcctgctggcgatggtcggcaaggccgaacgcggaccg
gcggcggtggaggcgatccgcgaccatcagtcggcctatctgatggcggtgggcggcgcc
gcctatctcgtcgcgcgcgcgatcaagggcagcaaggtggtcggcttcgaggacctcggc
atggaggcgatctacgagttcgaggtgcaggatttcccggtgacggtggcggtggattcg
acgggcgccaacgtccaccagctcgcgccgctggtatggcgggagaggatcgcgaaggag
aagctgctggagaaggcgtga
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