Sphingomonas cannabina: LZK98_19120
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Entry
LZK98_19120 CDS
T08607
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_19120
Transporters [BR:
scab02000
]
Other transporters
Pores ion channels [TC:
1
]
LZK98_19120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
MtrB_PioB
Motif
Other DBs
NCBI-ProteinID:
UIJ45130
LinkDB
All DBs
Position
4057549..4060170
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AA seq
873 aa
AA seq
DB search
MRMKLFAGVALVAFTLPGAAYAQSTGSIDFDQSDIVVTGSRGASEVGGFQAPDTSKAKAV
LTQEFINRQAPGQTINDTINQLPGVSFQNNDPFGSAGGTLTIRGFDSTRINQTFDGIPLN
DSGNYALYSNQQLDPELIEQVNVNLGSTDVDSPSAAATGSTVNYRTITPSKDFGAKLVGS
AGDSGFFRTFGMIQTGEIFDGGPRMFFAASQARNDVIFNNIGKVKKQQYNAKLYQDLGNN
GDFIAIAGHYNVNRNNFQGSLPLRWDTTVDTVTGTAPNQTIVRTPRTVGSGSANRFPIGD
EKPYYEIARCQTNQVAQAGVADAANSCGSTFDERYNPSNTGNIRINSRFTLADNLVLTVD
PSYQWVQANGGGTVVAQEGTRTIGSGASATRQTGYIGGTPYFGRDLNGDGDLLDTVRVLA
PSQTGTRRIGVIAGLRYDFSDTQTVRVNYTFDHARHRQTGEVGFLLPNGVPINVFPINNP
AEDAGGNVLQKRDRLSYAVLHQVSGEYRGRFFDALTVNVGLAMKFFKRDLNNYCYTTSAS
GFVDCFGTNAAATAAYQAANPTVQGPQQRILHYKKATPNVGLTYEITPKVSVFGNYSQGV
QVPGTDNLYNAFFFPVDTDQARPKPETTDNFDLGLRYRSSKFQAQIGAWYTNYQNRLAQS
YDPELDRSVYRNLGRVKKYGFDGFASYQPVPEFQVYAFGSYLHSEIQDDVVIGRLTSGDP
IYAQTAGKRESGAPVYMFGGGTTVDLPYVSFGVNVKRTGPRYIYDTNEPVRQLLTVNNAA
QVTQIFPNKTPAYTLVNADARVKLDWAGLNDQTYFQFNLLNVFNERYVGGFTANINQGPS
FNSATGAVTGYGAPPNAQLGYPRTFMGSFVIGF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgcggatgaagctatttgccggcgtggcgctcgtcgcgttcacgctcccgggcgctgcc
tatgcccagtcgaccggttcgatcgacttcgaccagtcggacatcgtcgtcacgggctcg
cgcggagcaagtgaagtcggcggcttccaggcgcccgatacgtcgaaggccaaggcggtc
ctgacccaggaattcatcaaccgccaggcgccgggccagacgatcaacgacacgatcaac
cagcttccgggcgtcagcttccagaacaacgatccgttcggctcggcgggcggcacgctc
accatccgcggcttcgattcgactcgcatcaaccagacgttcgacggcatcccgctgaac
gactcgggcaactacgctctctattcgaaccagcagctcgatcccgagctgatcgagcag
gtcaacgtcaacctcggctcgaccgacgtcgactcgccgagcgccgcggcgaccggttcg
accgtcaactatcgcacgatcacgccgagcaaggatttcggcgcgaagctggtcggatcg
gccggcgattccggcttcttccgcaccttcggcatgatccagaccggtgagattttcgac
ggcggcccgcgcatgttcttcgcggcgagccaggcgcgcaacgacgtcatcttcaacaat
atcggcaaggtcaagaagcagcagtacaacgccaagctctatcaggatctcggcaacaac
ggcgacttcatcgcgatcgccggccattacaacgtgaaccggaacaacttccagggttcg
ctgccgctccgctgggatacgacggtcgatacggtcaccgggacggcgccgaatcaaacc
atcgtccgcaccccgcgcaccgtcgggtcgggcagcgcgaaccgcttcccgatcggcgac
gagaagccctattatgagatcgcgcgctgccagaccaatcaggtcgcgcaggccggcgtc
gccgacgccgccaacagctgcggctcgaccttcgacgagcgctacaacccgtcgaacacg
ggcaacatccgcatcaactcgcgcttcaccctggccgacaacctggtcctgacggtcgac
cccagctatcagtgggtccaggcgaacggcggcggcaccgtggtcgcacaggaaggcacg
cgcacgatcggttcgggcgcctcggccacccgccagaccggttatatcggcggcacgccc
tatttcggccgtgacctcaacggcgacggcgacctgctcgacaccgtccgtgtgctcgcc
cccagccagaccggcacgcggcgcatcggcgtgatcgcgggcctgcgctatgatttcagc
gatacgcagaccgttcgcgtcaactacaccttcgatcacgcccggcatcgccagaccggc
gaggtcggcttcctgctgcccaacggcgtgcctatcaacgtcttcccgatcaacaatccg
gccgaggatgccggcggcaacgttctccagaagcgcgaccgcctctcctatgcggtgctg
caccaggtttcgggcgagtatcgcggtcgcttcttcgatgcgctgacggtcaacgtcggc
ctggcgatgaagttcttcaagcgcgacctgaacaactattgctacacgacgagcgcctcc
ggcttcgtcgattgcttcggcaccaacgcggccgcgaccgccgcctatcaggccgcgaac
ccgaccgtccagggcccgcagcagcgtatcctgcactataagaaggcgacgccgaatgtc
ggcctcacttatgagatcacgccgaaggtgagcgtgttcggcaattactcgcagggcgtc
caggtgcccggcacggacaatctctacaacgccttcttcttcccggtggacaccgatcag
gcgcgcccgaagccggagacgaccgacaatttcgatctcggcctgcgctatcgctcgtcg
aagttccaggcccagatcggcgcatggtacaccaattatcagaaccgcctcgcgcagtcc
tatgatccggagctcgaccggtcggtctaccgcaatctcggccgcgtgaagaaatacggc
ttcgacggcttcgccagctatcagccggtgcccgaattccaggtctatgccttcggctcc
tatctccactcggagattcaggatgacgtcgtgatcggccggttgaccagcggcgatccg
atctatgcccagaccgcgggcaagcgtgaatcgggcgcgccggtctacatgttcggcggc
ggcaccacggtcgacctgccgtacgtcagcttcggcgtgaacgtgaagcggaccggcccg
cgctacatctacgacaccaatgagccggtgcgtcagctgctgaccgtcaacaatgcggcg
caggtcacgcagatcttcccgaacaagacgccggcctatacgctggtcaatgccgatgcg
cgggtgaagctcgactgggcgggtctcaacgaccagacctatttccagttcaacctgctc
aacgtcttcaacgagcgttacgtcggcggcttcaccgcgaacatcaaccaggggccgagc
ttcaactcggccaccggcgccgtcaccggctatggcgcgccgccgaacgcccagctcggc
tatccgcggaccttcatgggatcgttcgtcatcggcttctaa
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