Sphingomonas cannabina: LZK98_19180
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Entry
LZK98_19180 CDS
T08607
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
scab
Sphingomonas cannabina
Pathway
scab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LZK98_19180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scab03400
]
LZK98_19180
Enzymes [BR:
scab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LZK98_19180
DNA repair and recombination proteins [BR:
scab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LZK98_19180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UIJ45141
LinkDB
All DBs
Position
4077586..4078242
Genome browser
AA seq
218 aa
AA seq
DB search
MSFAPGPIPATEPPRDCPRCPRLVALREALRVEHPGWWNAPVPAFGDPESWLGIIGLAPG
KHGANRTGRPFTGDYAGELLFGTLAKFGLAAGRYEGRPDDGLRLTGAVILNSVKCLPPEN
KPTPEETRTCRTFLDGQVAALPRLRVFVALGQIAHQSAVKVLGGKLPKARFAHLAEHRMP
DGRILIDSYHCSRYNQNTGRLTAEMFEAVFARAVELGG
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttcgcacccggccccattcccgcaaccgagccgccgcgcgactgcccgcgctgt
ccgcggctggtggcgttgcgggaggcgctcagggtcgagcatccaggctggtggaatgca
cccgttccggcgttcggtgatccggaaagctggctcggcatcatcggccttgcccccggc
aagcacggcgccaaccgcaccgggcggccgttcaccggcgactatgccggcgagttgctg
ttcggcacgctggcgaagttcggtctcgccgccggccgttacgagggacggcccgacgac
ggcctgcgcctcaccggcgcggtcatcctcaattcggtcaaatgcctgccgcccgagaac
aagccgacaccggaggaaacccggacctgccggaccttcctcgacggccaggtcgcggcg
ctgccccggctgcgcgtgttcgtcgcgctcggccagatcgcgcaccagtcggcggtgaag
gtgctgggcggcaagctgcccaaggcgcgtttcgcccatctcgcggagcaccggatgccc
gacgggcgtatcctgatcgatagctatcactgctcgcgctacaaccagaacaccggccgg
ctgacggcggagatgttcgaggccgttttcgcgcgcgccgtagagctcggcggttga
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