Sphingomonas cannabina: LZK98_19730
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Entry
LZK98_19730 CDS
T08607
Symbol
glcF
Name
(GenBank) glycolate oxidase subunit GlcF
KO
K11473
glycolate dehydrogenase iron-sulfur subunit [EC:
1.1.99.14
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00630
Glyoxylate and dicarboxylate metabolism
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LZK98_19730 (glcF)
Enzymes [BR:
scab01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
LZK98_19730 (glcF)
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Gene cluster
GFIT
Motif
Pfam:
CCG
Fer4_8
Fer4_7
Fer4_17
Fer4_10
Fer4_16
Fer4_6
Fer4
Fer4_9
Fer4_4
Fer4_2
Fer4_21
Fer4_18
Cytochrom_C552
Motif
Other DBs
NCBI-ProteinID:
UIJ45245
LinkDB
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Position
complement(4216305..4217591)
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AA seq
428 aa
AA seq
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MQTHFSPEQLADPAMAASEAVIRKCVHCGFCTATCPTYVLLGDELDSPRGRIYLMKDMLE
NEREPTAEIVKHIDRCLSCLSCMTTCPSGVNYMHLVDHARAYIEERYRRPLRERLFRTLL
AQVLPYQGRFRLALALARLARPATPLVERIAALKPMAAMLALAPNRVPPAPSDAPSPAPQ
ARGRVALMQGCAEPVLRPEIRAATVRLLNRAGYDVTFAPGEGCCGALVHHMGKDAASLAA
ARRNVDAWTALIEDGGLDAIVITTSGCGTTIKDYGFMLREDPAYADKAARVSALAKDVSE
LLVEAELPAGDGHGLTVAYHAACSLQHGQKVTEAPKRLLADAGYVVRTPVEAHLCCGSAG
TYNILQPEIAGKLGDRKAANLARLDADVIATGNIGCAVQIGQRAAIPVVHTVELLDWATG
GPKPAAMN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccatttctcccccgaacagctcgccgatccggcgatggccgcgtccgaggcg
gtgatccgcaaatgcgtgcattgcggcttctgcaccgcgacctgcccgacctatgtcctg
ctcggcgacgagctcgacagcccgcgcggccgcatctacctgatgaaggacatgctcgag
aacgagcgcgagccgaccgcggagatcgtcaagcacatcgaccgctgtctctcctgcctg
tcgtgcatgaccacctgcccgtccggcgtgaactacatgcacctggtcgaccacgcccgc
gcctatatcgaggagcgctatcgccggccgttgcgcgagcggctgttccgcacgctgctg
gcccaggtgctgccctatcaggggcggttccggctcgcgctcgccctggcccggctcgcg
cggccggcgacgccgctggtcgagcgcatcgccgcgctcaagccgatggcggcgatgctg
gcgctggcgccgaatcgggtgccgcccgctccctccgacgcaccctcgccggcgccgcag
gcgcgcggccgcgtcgcgctgatgcagggctgcgccgagccggtgctgcgtcccgagatt
cgcgcggcgacggtacggctgctcaaccgcgccggctatgacgtgacgttcgcgcccggc
gagggctgctgcggcgcgctggtccatcacatgggcaaggacgccgcgagcctcgccgcc
gcgcgccgcaacgtcgacgcctggaccgcgctgatcgaggacggcgggctcgacgcgatc
gtcatcaccacctcgggctgcggcaccacgatcaaggactatggcttcatgctgcgcgag
gaccccgcctatgccgacaaggcggcgcgggtgtcggcgctggcgaaggacgtgagcgag
ctgctggtcgaggcggagctgcccgccggcgacgggcacgggctgacggtcgcctatcac
gccgcctgctcgctccagcatggccagaaggtcaccgaggcgccgaagcggctgctcgcc
gacgccggctatgtcgtgcgcacgccggtggaggcgcatctctgctgcggctcggccggg
acctacaacatcctccagcctgagatcgccgggaagctcggcgaccgcaaggcggcgaac
ctcgcccggctcgatgccgacgtgatcgccaccggcaacatcggctgcgcggtgcagatc
gggcagcgggcggcgattccggtggtccataccgtcgagctgctcgactgggcgaccggc
gggccgaagccggcggcaatgaattag
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