Stomoxys calcitrans (stable fly): 106080786
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Entry
106080786 CDS
T07664
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
scac
Stomoxys calcitrans (stable fly)
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scac03041
]
106080786
Spliceosome [BR:
scac03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106080786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
UBA_At5g58720
ARM_TT21_5th
DUF5426
Motif
Other DBs
NCBI-GeneID:
106080786
NCBI-ProteinID:
XP_013097788
UniProt:
A0A1I8PYB1
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All DBs
Position
2:90203887..90226601
Genome browser
AA seq
1076 aa
AA seq
DB search
MASTENNVLENENPGRRTRSGRRTSTTQPMASPARATRRSKKAQQEHQELIEQPEEGLEE
EQEQPSFIEEMMAEAAQGVVLMDSEQEQSDLHIQQTVTVAEEDVDDISGEDNANVISEAN
LDDKSSSFPFGPEGGHSETSEDVGDHQDIEKNIIEENQQNAQENSLLASLAGDNANSLPS
VGGGDSEKENFEAKVLNHDDIVDNCEKMDSEDSLSEPAIVSDIPISGGDISDATIQNTEI
ISEDELPLPTKPEINDAEEVSDEELPAPQRAELPPDAEVISEDELPTGADKRSPSPSRTT
ETSRKKRKADDEAETAKDVVDSDQIKKDEQYNPMSPTSESNDSTAPMEKKAKIEESEPKD
KEKRKEKEREKDKESHNSTSSKDKEKEKEREKEKEKERKKLPDLDKYWRAVKTDPADFTG
WTYLLQYVDNESDAEAAREAYNAFLAHYPYCYGYWRKYADYEKRKGIKANCNAVFERGLE
SIPLSVDLWIHYLSHVKTTQPDDEDFIRSQFERAVNACGLEFRSDKLWDAYLKWENEGKR
YTNMVNIYDRLLAIPTQGYSGHFDNFQDLINQHSITSTIKSDEIIKIRTELRESSSKSSS
KSKSRRASSKDKDHESKDKDKEKEKEKLEKKPEDKSSEKDAENNVEPMAVDIDEATAVEE
KKPAHLEDLSDFSTFTEEEISTIKDKVISIRRKLHKSTVAAVTARWTFEEGIKRPYFHVK
PLERCQLKNWKDYLDFEIEKGDRKRILVLFERCLIACALYDEFWLKMIRYLETILAEPGI
ATVLSDVYRRACEIHHPDKPSLHLMWSAFEECQSNFDKAAEILVNLENRVPNLLQVAYRR
INIERRRGDNDKCKSLYEHYIATAKNKNIAGSLAIKYARFLNKICLDLESGLRVLRQALE
KDNANTRVALQMIDLALQRPTVDEDEVVLIMDRFMARENIEPEQKVLFAQRKVEFLEDFG
STAKGLQEAQRALQLALNKANEAKKKRESSPSRKSTGHKDSSAAASAAQAGYNNGSSGAA
SYGYSSSNAVAYYGQPNSGSYPQQQQQSSYDSYYNHWQYNTGYSGYGQWGGYTNYY
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacggaaaacaacgttttggaaaatgaaaatcctggacgtcgcactcgttcg
ggaagacgtacatcaacaacacaacctatggcttcacctgccagagctaccaggcgttca
aagaaagctcaacaggaacaccaagagctgattgaacagcccgaagaaggattagaagaa
gaacaagaacagccaagttttatagaggaaatgatggcggaagcagcacaaggagtcgtt
ttaatggacagcgaacaagagcaaagcgatctacacatacagcagacagtaaccgtagca
gaggaggatgtagatgatatttctggagaagataatgcaaatgtaatttctgaggcaaat
ttggacgataaatcgtcatcttttccatttggacctgaaggaggtcattcggaaacttca
gaagatgtgggtgaccatcaggatattgagaagaatataattgaagaaaatcaacaaaat
gcacaagaaaactcgttgctggcctctctagctggcgataatgccaacagtttaccctct
gtgggtggaggagattccgaaaaggaaaactttgaagctaaagtccttaatcatgatgat
attgtagataattgcgaaaagatggactctgaagattcactctccgaaccggccatagtc
agtgacattcccatttcaggcggtgatataagtgatgccacaatacaaaacacagaaatt
atatccgaagatgagttgccacttccaacaaaaccagaaataaatgatgcagaggaagtt
tccgatgaagaattgccggcaccacaacgggccgagttgccaccagatgccgaggttatt
tccgaagatgaacttcccacaggggctgataaacgcagcccatcgccatcccgcaccact
gaaacatcaaggaaaaaacgcaaagcagatgatgaagccgaaacggctaaggatgttgtt
gattcggatcaaatcaaaaaggatgaacaatacaatcccatgagcccaactagtgagagt
aacgattcaacagcacccatggaaaagaaggcaaaaatagaagaatcagaacctaaagac
aaagagaaacgtaaagaaaaggaaagggaaaaggataaagagagccacaattccacctcc
agtaaagacaaagaaaaagaaaaggagcgtgaaaaggaaaaagagaaggaacgcaaaaag
ttgcccgaccttgataaatattggcgtgctgtcaaaacagatcctgctgattttaccggt
tggacatatctgctacaatatgtagacaatgagtctgatgctgaagctgcccgagaagca
tacaatgcttttttggctcattatccctattgttacggctactggcgtaaatatgccgat
tacgaaaagcgtaagggtattaaggcgaactgcaacgcggttttcgagcgtggtttggaa
tctatacctttatcggtggatttgtggatacattatctgtcgcatgttaagaccactcaa
ccagatgacgaagacttcattcgatcacaatttgagcgtgctgtgaatgcctgtggcctt
gaatttcgttcggacaagctatgggatgcatatttgaagtgggaaaatgaaggcaaacgt
tatacaaatatggtcaatatctatgatcgactcctggctataccgacacaaggatatagt
ggtcattttgataatttccaagatttaataaaccaacactccattaccagtacaatcaaa
tcggatgaaattatcaaaattcgtacagagttacgggaatcatcttcaaagtcttcgtca
aagtcaaaatcacggcgtgctagttccaaagacaaggatcatgaatcaaaagacaaggac
aaagagaaggagaaagaaaaactcgagaaaaaaccagaagacaaatcatctgaaaaagat
gcagaaaacaatgtagaacctatggctgttgatattgatgaagccactgcagtggaggaa
aagaaaccagcacacttagaagatctcagcgatttttccaccttcaccgaagaagaaatc
tcaacgataaaagataaagttatatcgataagacgtaaattacacaaaagcacagttgct
gctgttactgcccgatggacctttgaagagggcattaaacggccctatttccatgtgaaa
cctttggaacgatgtcagttaaagaactggaaagactatctggactttgaaattgagaaa
ggtgatagaaaacgcattttggttctattcgaacggtgtcttatagcatgtgctctttac
gatgagttctggttgaaaatgatccgctatttggaaacaatattggcggagccaggaata
gcgaccgttttaagcgatgtctatcgccgagcatgcgaaatccatcatcccgataagcct
agtctacatttgatgtggtccgcatttgaagagtgccaatcgaatttcgataaagctgcc
gaaattttggtaaatctagagaatagggtgcctaatcttctgcaagttgcctatagacgc
ataaatatagagcgtcgccgcggtgacaatgacaaatgtaagtcattatatgagcattac
atagcaacagccaaaaataaaaatattgctggtagcttggcgataaaatatgctcgattc
ctgaataaaatatgccttgatctggagtctggcttgagggttttgcgtcaagctcttgaa
aaagataatgccaatacacgggtagccttgcaaatgatagatctggcactgcagcgacca
acagtggacgaagacgaagttgttctgataatggataggtttatggcccgagaaaatatt
gagccggaacagaaagttttatttgctcaaagaaaagtggaattcctagaagatttcggt
agtactgccaagggattgcaagaagcacaacgagctctacagctggctttaaacaaagcc
aatgaagcaaagaagaaacgcgaatcaagtcccagccgaaaatcaacaggccacaaagat
tcctccgccgcagccagtgccgcacaggcaggctacaataatggctcttcgggagccgct
agttacggctatagctctagcaatgctgtagcatattatggtcaaccaaatagtggttca
taccctcaacagcaacaacaatcatcatatgatagttactacaatcattggcaatacaat
acgggttatagcggctacggtcaatggggtggctatacaaattactattga
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