Stomoxys calcitrans (stable fly): 106080857
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Entry
106080857 CDS
T07664
Name
(RefSeq) uncharacterized protein LOC106080857
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106080857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scac03041
]
106080857
03009 Ribosome biogenesis [BR:
scac03009
]
106080857
Enzymes [BR:
scac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106080857
Spliceosome [BR:
scac03041
]
Complex A
U1 snRNP components
U1 related factors
106080857
Complex B
106080857
Ribosome biogenesis [BR:
scac03009
]
Eukaryotic type
Pre-60S particles
Helicases
106080857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Utp25_C
TAF4
BAF1_ABF1
DNA_circ_N
Motif
Other DBs
NCBI-GeneID:
106080857
NCBI-ProteinID:
XP_013097910
UniProt:
A0A1I8QCJ0
LinkDB
All DBs
Position
4:50661556..50687402
Genome browser
AA seq
944 aa
AA seq
DB search
MYANGYTAAAPGVGGAPIQSYGNANAGGPPRADRPHYQRNANGIANGAVSAVAGGYGGAP
NNMAGGYGGAPQNAGGYGGGYRGSFNPMMPNGGFYGNTGGGFQPRAKNPNFTPRYQKPQN
SGGYQGNNMYKPSINLANLSKEERAELQREKAKNPGRTLVTPEWHNLQPFKKNFYNPHQN
TLNMNEQQVADMRADLQITVSGNSIPHPIGSFEECTLPEYTIEEMKRQGFTKPTAIQAQG
WPIALSGRDLVGIAQTGSGKTLAYMLPAMVHIANQPPLQRGDGPIALVLAPTRELAQQIQ
SVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRTTNLKRC
TYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALAGDFLNDYIQINI
GSMNLSANHNIRQIVEVCQENEKPQRVVKLLNEILPTTNNAANNSNKIIIFVETKIKVEE
ILQIIRSEGYTATSIHGDKSQAERDLTLKDFRNGKSNILIATDVASRGLDVEDLQYVINY
DYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQARELISVLEEAGQQPNAALIDMAR
SMGGSGNGRGNNNNRRWMQNNGGGHQQQQRNNPLNYQANGGGNSGGYTPKPHYQQYGNNG
GGNSYNGNQGGTPGASRSGNGGMGNWNNRNNGQFNSNGQDQGQGGNRTYRPRAPFNSANG
GGPRPVMGGFMHPHMAPHMQQGAAASYMSPQQQYRPRGQYMPPNGNAPRFQQQQQQQQFQ
KREYQQQPANGQFNKPQSQPQMENNQCQNENAVAAQQQQQQQQQQQQMANIAAAVAAASG
QVGGPAEYPSNVSTPPAGALYAAPAQSPPTSAGAAYMYDASGMLAAAAAAGNPYATGQFG
PPPTAYYAHPHQFTTAAPAAPNGMATNGNGAGTPGAEMMGQQQQ
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaaacggttatactgctgcagctccgggagttggtggtgcgccaattcaaagt
tacggaaatgccaatgccggcggacctccacgcgcagatcgtccccactatcagcgcaat
gcgaatggcatagctaatggtgctgttagcgctgttgcaggcggttacggcggtgccccc
aacaacatggcaggaggttacggcggtgctccgcagaatgcaggaggttacggaggtggt
tatcgcggcagttttaaccctatgatgcctaacggaggtttctacggtaatactggtgga
ggctttcaaccacgtgccaaaaatcctaattttacaccacggtatcaaaaaccacaaaat
agtggaggctaccaaggcaacaatatgtataagccgtcaatcaacttggccaatctatcc
aaggaagagcgtgccgaattgcagcgtgaaaaggctaaaaatcctggacgaacccttgtc
acacccgagtggcacaatttacaaccattcaagaagaacttctataacccccatcaaaat
actttgaatatgaacgagcagcaagtggcagatatgcgggcagatttacagattacagta
tcgggcaatagcattccccatccaattggttcttttgaagagtgcacactccctgaatac
accatagaagagatgaaacgccaaggttttaccaaacctacagctattcaagctcaaggt
tggcctattgccctgtcaggacgtgacttagtgggtatagctcaaacaggatcgggaaag
acattggcttacatgttgccggccatggtccatatcgccaaccaaccaccattacaacgt
ggtgatggtccaattgctttggttcttgctccaactcgcgagttggcccaacaaatacaa
tccgttgttcgcgattatggtcatttgtgcaaacccgaaatacggcacacatgcattttt
ggtggttcttccaaggtgccacaggctcgcgatttagaccgaggtgttgaggttataatt
gccacacccggccgtttgatcgattttcttgagaatcgtactactaacttgaaacgctgc
acctatttggtgctggatgaagctgatcgtatgctggacatgggcttcgaacctcaaatc
cgcaaaatcattgaacaaatacgtccagatcgtcaggttgttatgtggtcagccacttgg
cccaaagaggttcaagcgttggccggtgatttccttaacgactacattcaaataaatatt
ggctcgatgaacttgtcagctaatcacaacattcgtcaaattgttgaagtttgccaggag
aatgagaagccacaacgcgttgtcaagctattgaatgagatactaccaaccaccaacaat
gctgcgaataacagcaacaaaattattatatttgtagagacaaaaattaaggttgaagaa
atcttgcaaatcattcgcagtgaaggatatactgcaacatccatacacggtgataaatct
caagcggaacgtgatttaaccttaaaagatttccgtaatggtaagtccaatattttgatt
gctactgatgttgcttcacgtggtttggatgttgaggacttgcaatatgtaatcaactac
gattatccgaactcatcggaaaattatgttcatcgcattggccgcaccggacgctgtcaa
cagctaggcactgcttatacattcttcacaccagacaatgccaaacaggcaagagaacta
atttcagtcttggaagaggcaggacaacagccaaatgccgctttaatagatatggcccga
tccatgggaggcagcggcaatgggcgtggcaacaataacaatcgacgttggatgcaaaac
aatggtggaggccaccagcaacagcaacgcaacaatcccttgaattatcaagctaatggc
ggtggtaattctggtggctataccccaaagccacattaccagcaatatggtaacaatggt
ggtggtaacagctataatggtaatcaaggtggaactcctggagcatctcgaagcggaaac
gggggcatgggtaattggaacaatcgaaataacggccaattcaatagtaatggtcaagat
cagggccaaggaggaaacagaacctatcggccacgagcacctttcaatagtgctaacggt
ggtggcccacgaccagtcatgggcggttttatgcatccccatatggcgccacatatgcaa
cagggtgccgctgctagttatatgtcaccgcagcaacagtatcgccctcgtggccagtat
atgccaccaaatggcaatgcaccacgtttccaacaacaacaacagcagcagcagttccaa
aaacgtgaataccagcaacaaccagcaaacggtcaattcaataagcctcagtcacaacca
caaatggagaataaccagtgtcaaaatgagaacgcagtggcagcacaacaacaacaacag
caacagcagcaacaacagcaaatggcaaatattgcggctgctgtggccgcggctagcggt
caagtaggtgggccagcagaatatcccagcaatgtgtccacaccaccagctggcgccctt
tacgcagctccagcccaatcgcctccaacatcggcaggtgctgcctatatgtacgatgcc
agcggtatgctggcagccgccgctgcagccggcaatccctatgccacaggacaattcgga
ccaccacccacagcctactatgcccatccccatcagttcaccactgctgctcccgctgct
ccaaatggaatggccaccaatggcaatggagctggcacacctggcgccgaaatgatgggt
caacagcaacagtag
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