Stomoxys calcitrans (stable fly): 106081082
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Entry
106081082 CDS
T07664
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
scac
Stomoxys calcitrans (stable fly)
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scac03000
]
106081082
Transcription factors [BR:
scac03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106081082
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106081082
NCBI-ProteinID:
XP_013098255
UniProt:
A0A1I8PV81
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Position
3:177644951..177647837
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AA seq
552 aa
AA seq
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MLTMESDMKGGILHATMPPHHASAALHGHAASPYSALGPLMNLGQSHLTQSHLSHHHQHH
MSSHLASQGSSAPNGTTSVLSSLQNSMAQTLNGNASVQHGSPLHSSSDLSPTQSSHTSIG
SHHMTSPGQQNHHHSHHHGGGGMGGQSTPLSSGGSSTGGGGGGVGGNGINNNSNPSSASK
NAQSAAERVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSENEKRPFID
EAKRLRAVHMKEHPDYKYRPRRKTKTLTKTKEKYPMGVGGLLQASEGGGTPSARSSNTNS
ISSAAQQAAGVNREMYPMSAPNGYMPNGYMMHDPSAAAYQSQHGAYMGNYHRYDMGQMHQ
AAANYMNAGTGYGMYSTVSGGQTSPYGNVQQPGSPYGTGTGGSVQPQPGSPYGLSGQPGS
QVSCQSHSPSDSSVKSEPVSPSPQLQHNSASQQNSAAAAAAAAAVITNNNNHVLKREYLS
GQQPSAELNHLMNMYHLSDGMQVSAAAAAAAAEHHQRNLMHYQNSSPDLQHQHQAHHHHQ
QSMRSMAPLAHM
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccatggagtccgatatgaaaggtggcatcctgcatgccactatgcctccacat
catgcctcggcggccttgcatggccatgccgcttcaccctacagtgctttgggccccctc
atgaatttgggccaatcgcatttgacacaatcccacttgtcgcatcatcatcagcatcac
atgtcctcccacttggccagccagggttcttcagcgccaaatggcaccaccagcgttttg
agctctttgcaaaatagcatggcccaaacgttgaatggcaatgccagtgttcagcatggt
tcgcccttgcacagctccagcgacttgagtcctacacagagtagccacaccagcataggc
agccatcacatgacctcgccgggccagcaaaatcatcatcattcgcatcatcatggcggt
ggtggtatgggcggtcaatccacacctttgagttcgggaggcagctcgacaggtggtggt
ggcggcggcgtcggcggcaatggcattaacaacaactccaatccctcgagtgccagcaaa
aatgcccaaagtgccgcagagcgtgtcaaaaggcccatgaacgcctttatggtgtggtcc
agaggccagcgccgcaaaatggcctcggacaatccaaaaatgcataattccgaaatctcc
aagcgtttgggggcccagtggaaagatttgtccgagaatgagaagaggcccttcattgat
gaggccaaacgcctaagagccgtacacatgaaggaacatcccgattacaaatatcgtcca
cgtcgcaaaacgaagaccttaaccaagaccaaggagaaatatcccatgggtgtgggaggc
ctattgcaagcctctgagggtggcggtaccccctcggcgcgctcatccaacacaaattcg
atctcatcggccgctcaacaggcggcgggagttaatcgtgaaatgtatcccatgagtgct
cccaatggctacatgcccaatggctatatgatgcatgatccctccgccgccgcctatcaa
agtcaacatggagcctacatgggcaactatcatcgctatgacatgggccaaatgcatcaa
gcggctgcgaattacatgaatgccggcaccggctatggcatgtacagcactgtctccggc
ggccagacctcaccctatggcaatgtccaacagcctggttcaccgtatggcacgggcacc
ggcggcagtgtacagccccagcccggctcaccctatggcctaagcggtcaacctggttct
caagtctcctgccaaagtcacagtcccagcgattcgagtgtcaaatcggaacccgtctca
cccagtccccagctgcaacacaattccgcctcacaacagaattccgccgccgccgccgcc
gcagcagcggctgtcataacaaataacaataatcatgtgttgaaacgggaatacctaagt
ggccaacagccttcggccgagttgaatcacctcatgaatatgtatcacctgtccgacggc
atgcaggtgtcggcagcagcggcggcagctgcagcggaacatcatcaacgcaatttgatg
cactatcagaatagttcgccggatttgcagcatcagcatcaggcgcatcatcatcatcag
cagtcgatgcgttccatggctccccttgcccatatgtga
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