Stomoxys calcitrans (stable fly): 106081318
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Entry
106081318 CDS
T07664
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac04140
Autophagy - animal
scac04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106081318
04148 Efferocytosis
106081318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scac04131
]
106081318
Membrane trafficking [BR:
scac04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106081318
Hops complex
106081318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf_RING_Vps8
Yuri_gagarin
zf-C3HC4
zf_RING_Vps8_fungal
zf-RING_5
zf-C3H2C3
zf-RING_2
zf-rbx1
DUF2175
zf-C3HC4_2
Syntaxin
Snapin_Pallidin
Synaptonemal_3
FapA
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
106081318
NCBI-ProteinID:
XP_013098659
UniProt:
A0A1I8PFA3
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All DBs
Position
4:complement(108280594..108289857)
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AA seq
990 aa
AA seq
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MSLGNDDDMDLADRMLLAKPKFLKSIHGGGDNASVASMPLTTANGDKCYETPIFSKREMT
LRIPKEYNGNLTHLVVCKNWMVCLLAAPPPSSQVTLFRFFLPRVMPPGEISLEKYLAGYK
IGKLFLDYTGHHILVSLIPKSPGLSADFLYIHGNGTKVRRIEKFKDHEITSVAFNYDLGN
ESTTGPILLGTSKGLIFETELTLEADKPLYRKQVYDVGLGRPKYDVTGLEFRHVPNAPNQ
YIVVATATDCILTFQGNLRTEERTLQPIFNGYINGTQSHGYEVAKTDMKYSVLQLNGEPN
EKYPTQWGWLCGSGLRHGEVAQSSIKDEKFLLEDHLIPLDKDLEQRKHLSYEEKRLNVPK
AFVLTAYHVLLMYHDHVTGICLLDQSIVYEEYFTEKSGKLLNIHKDPFTGVIYLCAEKKV
FNFKVDEERRNIWRIYLNMGIYDMAEIHAANDEENLDTVLKSKAQALFDDKKYEEAAKIY
AETQMPFEEVCLKFIDLPEKRPIITYVQKRLETLSPEADEQLFVLVAWLIDLYLTEINYP
GRSKEEKHKWQVEYDEFMLNFSVIKCYRANRTAIQDLITQHADDHNLAQFAIANEDYDEV
LQQHIEAEKYLQALHILQQQKNIELYYKYCPTLIEYLPKETIELMMSQGRKLNVQKLIPT
ITTIDSPVHIAEITKYLEYCIYNLGETYQAIHNFLLRLYAEHQPGKVMEYLKNEGQDITL
VHYDVNYALLMCMDFGIQKACVFLYSLQKLWPAAVDLALTFDIKLAKETASKPRDEKVKT
KLWLKIAYHEIKDTNDVKKALDLLKECDLHIEDLLPFFSDFEKIDDFKEPICQALKDYNH
KLQELQHDMEDVSKQAERVQSDLQNLRENCIRIEVHEQCNCCETYLLVKPFFIFACGHKF
HADCLEKLVVPHLSSEQARKLTMLKQQLENMLAQSAAMADKSNESQYKREKVKQEIEEIL
AADCVYCGLMIETIDQPFVEDWDQVNVDWE
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaggtaatgatgatgacatggatttggcggatagaatgctgctggctaagccc
aagttcctaaaatctatacatggaggcggggataatgccagtgtcgcctcgatgccacta
acaacggcgaatggtgacaaatgctatgaaacgcccattttcagtaaacgggaaatgacc
ctacgcatacccaaggaatacaatggaaatcttacccatttagtggtgtgtaaaaattgg
atggtatgcctcttggcagcaccaccgccttcctcacaggtcacactttttcgtttcttc
ttgcccagagtaatgccaccgggagaaatttccttggaaaaatatttggctggctataaa
attggcaaattatttctggattataccggacatcacatattggttagcctgatacccaaa
tctcctggtctttcggctgatttcctttatatacatggcaatggtacaaaggttagacgc
atagagaaattcaaggatcatgaaataacatcggtggccttcaattatgatttgggcaac
gagtcaaccaccggtcctatactactgggcaccagcaaaggattgatatttgaaacggag
ttaactttggaggcagacaaacctttatatcgcaaacaggtctacgacgtgggtctggga
agaccaaaatatgatgtaacgggtcttgagtttcgccatgtacccaacgcacccaatcaa
tatattgtggtagccacagcaactgattgcatactcacattccaaggcaatttgcgaaca
gaagaaagaactctacagcccatattcaacggctatatcaatggtacacaatcacatggc
tacgaggtggcaaagactgatatgaaatattcggtcttgcaactgaatggagaacccaat
gaaaagtatcccacacaatggggttggctatgtggttccggtttaaggcacggtgaggtg
gctcaaagttcgattaaagatgaaaaattcttgctggaggatcatctcatacccttggat
aaggatttagagcaacgtaaacatttatcctatgaggagaaacgtctcaatgtccctaag
gcatttgtgctcaccgcctatcatgttctacttatgtatcatgaccacgttaccggtata
tgtctactcgatcagtccattgtctatgaggagtatttcaccgaaaagagtggtaaactt
ttgaacatacacaaagatccctttaccggtgtcatttatttgtgcgccgaaaaaaaggtt
ttcaattttaaagtggacgaggaacgccgtaatatctggcgcatttatttaaatatgggc
atctatgatatggctgaaatacatgctgccaatgatgaggaaaatctcgatactgtttta
aaatcaaaagcccaggctttgtttgatgacaagaaatacgaagaggccgcaaaaatttat
gctgaaactcaaatgccttttgaagaggtttgcttaaaatttatagatttgccagagaag
cgacccatcatcacatatgtgcagaaacgtttggaaacattgtcgccggaggccgatgaa
cagctctttgttctggtggcttggcttatcgatctttatttgaccgaaattaactatcct
ggacgcagcaaggaggaaaaacacaaatggcaagttgaatacgatgagttcatgttgaat
ttctcagttatcaagtgctacagagcaaatcgtaccgccatacaagacctaataactcaa
catgcggacgaccataatctagcccaatttgccatagccaatgaagattacgatgaggtg
ttgcagcagcatatagaagccgaaaaatatctacaagctttgcatatcttgcaacagcaa
aaaaatattgaattgtattacaaatactgtcccactctaattgagtatctgcccaaagag
accattgagctaatgatgtcccaagggcgtaaattgaatgttcaaaagcttattcccacc
atcaccaccatcgattcgcctgtgcacatagctgaaattaccaaatatctggagtattgc
atttataacttgggcgaaacctatcaggcaatacacaattttctactacgcctctatgcc
gagcatcaaccgggcaaggttatggaatatttgaaaaatgaagggcaagacataaccctg
gtgcattacgatgttaattatgctttgctgatgtgcatggattttggcatacaaaaggct
tgtgtgtttttgtattcattgcaaaaactttggccagcagctgtagatttggctttaaca
ttcgacattaaactggcaaaggagacggcatcgaagccgagagatgaaaaggtgaaaacg
aaattatggctgaaaatagcttaccacgaaataaaggatactaatgatgttaagaaagcg
ttggatcttttaaaggaatgtgacttgcacattgaagatttgttgccatttttctcggat
tttgaaaaaatcgatgattttaaagaaccaatttgtcaagctttgaaggactacaaccat
aaacttcaagaacttcaacacgatatggaagatgtcagcaaacaagccgaacgagttcaa
agtgatttacaaaatctacgcgaaaattgcattcgaattgaagtgcatgaacaatgtaat
tgttgtgagacatatttattggtaaaaccatttttcatttttgcctgtggccataaattc
catgcggattgtttggaaaaattagtagtgccccacctttcctctgaacaagctcgcaaa
ttgaccatgctaaagcaacaactggagaatatgttggcacaatcggctgctatggcggac
aaatcaaatgaatcgcaatacaagagagaaaaggtaaaacaagaaattgaagaaattcta
gcagctgactgtgtttattgtggcctaatgattgaaacaatcgatcaaccatttgttgaa
gattgggatcaagtaaatgttgattgggaataa
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