Stomoxys calcitrans (stable fly): 106081558
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Entry
106081558 CDS
T07664
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106081558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106081558
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106081558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
106081558
NCBI-ProteinID:
XP_013099036
UniProt:
A0A1I8Q084
LinkDB
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Position
2:236708652..236710837
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AA seq
617 aa
AA seq
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MADDANEDSWLYGTSNPDSTTNEEGGADEDTGLEKEQLQLSEKAENEALAAVTQGDDVNS
IQNKDDEPAGDAEELVEFEDPAHEMEEEENDTADTTENEPGEQGESRTGDDSEQDPDDDD
DDDSDDDINVVIGDIKAAPSTYNIKQRSNLLATASGQEKAKTAAQVGKFSIEDFEGVGSI
NGVAAHEFSIDSLEDKPWRKPGADITDYFNYGFNEETWRAYCERQKRFRVVESGVGLASL
TQNLNPPGEKIGDGNASMGQPMGLMPPGHTPPGHMGEQMMPPPGMMPPPGSHQGPPPRFG
MPRGPRPILPIPGAKENAIQVMTAECREYSRPGQMPPNFGGPGGAEEAFFHEPEPFDYGY
EPTQDSQWGRENPNWVPTGIKELTPGPNPSPSPQISGPPGMMPNQMGIPPPQMSGPPPQM
RHPHPQQAMGNMPPPNIGMVPPPMGMMMGPGGPPMRMPMGPPRMMGPNGPPSDRMDDERE
RRRREREWERERDRDRDRERSRRERSRSREKSRRRSKSREKERDKDREKRDRERDRDRSE
KEGETTERSDEERERRRRDRDRDRERSRRERSRSREKSRRRSKSREKDRERSKKSSTTTA
TSSSRTEKKSHRKEEEE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatgcgaacgaagacagttggttgtacggtacatcgaatccagattccaca
acaaatgaagaggggggtgccgatgaagacaccgggttagagaaagagcaattgcagttg
tcggaaaaagcggaaaacgaagccctcgcggcagtcacacaaggagatgatgtcaacagt
atacaaaacaaagatgacgaacctgccggcgatgctgaggagctggtggaatttgaagat
ccggcacatgaaatggaagaggaagagaacgatactgctgatacaactgagaatgagcca
ggggagcagggcgaaagtagaactggagatgattcggaacaagatcctgatgatgacgac
gacgatgactcggacgacgacataaatgttgttattggagatattaaagcagcccccagt
acgtacaatatcaagcaacgttcaaatttattagctactgctagtggccaggagaaagca
aaaacagccgcccaagtagggaagttttccatagaggattttgagggggttggttctata
aacggtgtcgcagcgcatgagtttagtattgactcattggaagataaaccatggcgaaaa
cctggtgcagatataacggattacttcaactatggctttaatgaggagacctggcgggct
tattgcgaacgtcagaaaagatttcgtgttgttgagagtggtgttggtttggcgagtttg
acacagaatctgaatccgccaggcgaaaagattggagatggcaatgcgtccatgggccag
ccaatgggtttgatgccgccgggtcatacgcctccaggccatatgggcgaacaaatgatg
cctcctccgggcatgatgccaccaccgggatcccaccagggcccaccccctagatttggc
atgcctagaggaccaagacctattttgcccataccaggtgctaaggaaaatgccatacag
gttatgactgctgaatgtagagaatattctcgaccgggacaaatgccaccaaatttcgga
ggtccaggtggtgctgaagaagcatttttccatgagccagaaccttttgattatggatat
gagcccacgcaggattcacaatggggtagagaaaatcccaattgggttccaactggtata
aaagaattgacgcctgggccgaatccttctccatcaccacaaatatcgggtcctccaggc
atgatgccaaatcaaatgggcatacccccgccacagatgtcagggccaccgcctcaaatg
cgacacccgcatcctcaacaagcgatgggtaatatgcctcctcctaatattggtatggta
cccccacccatgggcatgatgatgggacctggtggtcctccaatgcgcatgccaatgggc
ccacctagaatgatgggtcccaatgggccaccttcagatagaatggatgacgaaagggaa
aggaggcggcgcgaaagagaatgggagcgtgaacgggatagggacagagatagagaaaga
tcacgaagagagcggtcgcgaagtcgagaaaaatcacgacgtcgatccaaatctcgtgaa
aaggaaagggataaggaccgcgaaaaaagggatcgagaaagagacagagatcgaagcgaa
aaggaaggggaaactactgaacgttccgacgaagaacgcgaaagaagaagacgtgatcgt
gaccgagatcgtgaaagatcccggcgtgaacgctcaagaagcagagagaaatcccgtcga
cgctccaaatctcgtgagaaagatcgcgaacgttccaaaaagtctagtacaacaactgcg
acgtcatcaagtcgcactgaaaagaagtcccatcgcaaggaagaagaagaatga
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