Stomoxys calcitrans (stable fly): 106082040
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Entry
106082040 CDS
T07664
Name
(RefSeq) DNA mismatch repair protein spellchecker 1
KO
K08735
DNA mismatch repair protein MSH2
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106082040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scac03400
]
106082040
DNA repair and recombination proteins [BR:
scac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106082040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
RGS
AAA_27
GCP_C_terminal
ANC1_spectrin
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
106082040
NCBI-ProteinID:
XP_013099800
UniProt:
A0A1I8NX08
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Position
3:complement(189879511..189886558)
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AA seq
923 aa
AA seq
DB search
MDGIIVDKQAPQFNMDTNGRRNFIRFYKSLGEKPLTTIRFFDHTDSYTVHGKDDTNLIAR
MVYKSTAFISEMLPNDSDSIPYITLYKNKFESAVRELLLVRNYRVEVYVRRSSGSDWKVE
YRGSPGNLLQFEDIIFSNKEELVGNSILSLQLRMINNQRKVGVAAVEQNDCLFQVLEFVD
DDFFTELEATVVLLGPKECLLPSQEGEYEAVKNLLERNGIMVTVASKSQQSAEKGDLVQD
LNKLLRFSKGQQEDATGMAELTLTIAMEALKLVIKYLALTSDAGNLGHYQIKQLNLKRFV
HMDAAAVSALNVLPKPGTHPSSPSYRWQSVLGVLDRCHTPQGHRLMAQWVKQPLRSQEIL
NDRHNIVQCLLESPTTLSSLHEDYLKRIPDVLMLTKKLLRKKANLQDIFRIYQVMLRTPK
VINILRSLENATINSVICGPMQSFLEDLSGFKQMVEQVMDFDAIETGEYLVKASFDTDLR
EMKQRMTRLMEKMEDCQEKASRDLDLDKNSWVKLANVPNFGYTLRITLKDDTALRKNKDY
KIIDVLRGGIRFTTDKLTKINEEFVALREQYEEQQMAIVEEIIKVAVGYAAPLTSLNNEF
AQLDCLVSFGIVAQSAPIPYVRPKMLEEGSGELVLKDIRHPCLELQEHINFIANSVEFKK
DICNMLIITGPNMGGKSTYIRSVGTAVLMAHVGSFVPCSEATISMVDSILGRVGASDNII
KGLSTFMVEMMETSGIIRSATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTL
FATHFHEITNLSETVDTVKNCHMAAVADNENFTLLYQVRPGVMEKSFGIQVARLANFPEN
VVQNAQQIYNEFEDEHAAKQTEEDKGLLEKINKAIENLSTTGNNVDINESDLSKLVEQFT
QDIKKLDSEYFKSVLATAGGMAK
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggatggcataattgtcgacaaacaagcgccccaatttaatatggataccaatggtcgc
cgcaattttatacgcttttataaatcattgggcgagaaacccttaactaccatacgcttc
tttgaccacaccgattcctataccgttcacggtaaagatgacactaacctcatagcccgc
atggtttacaagtccactgctttcatcagcgaaatgctgccaaatgattccgactccata
ccttatattaccctgtataagaataaatttgagtcggcagtgcgtgaactgctcttggtg
cgcaactatagggtagaggtctacgtgcgtcgttctagtggctcagactggaaagttgaa
tataggggctctcccggaaatttattacagtttgaggatataattttctccaacaaagag
gagttggtgggcaatagcattttatcgctgcagcttcgcatgatcaataatcaaagaaag
gtgggtgtggcagcagtggagcaaaatgactgcttgtttcaggttttggagtttgtcgat
gatgatttctttaccgaattggaagcaactgtggtgctattgggacccaaggaatgtttg
ttgccatcacaggaaggagagtatgaagctgttaaaaatctgttggaacgcaatggtatt
atggttactgtggcctcaaaatcccaacaatctgccgaaaaaggagatcttgtgcaagat
ctaaataaacttttgagattcagtaaaggccaacaggaagatgccactggaatggcagaa
cttacgctgaccattgccatggaggccttaaaattagtcattaagtatttggccctaaca
agtgatgctggaaatctgggccattatcaaatcaagcaactgaatttaaaaagatttgtg
cacatggacgctgctgcggttagtgctttaaatgttctacctaagcctggtactcatccc
tcctccccctcgtacagatggcaaagtgttttgggagttttagatcgttgtcacactccc
cagggtcatcgtcttatggcccaatgggtgaaacagcccctacgtagccaagagatactt
aacgatcgtcataatatcgtacaatgtttactggaatctcccacaactttaagttctcta
catgaggactatttgaagcgtatacccgatgtattaatgctgaccaagaaattgttgcgt
aaaaaggccaatttacaagatatttttcgtatataccaggttatgttacgcactcccaaa
gtcattaatattttgcgttctctggaaaatgccaccataaatagtgtcatttgtggtcct
atgcaaagttttttagaagatttatccgggttcaaacagatggttgagcaagttatggat
tttgatgccatagagacgggagagtatttggtaaaggcctcttttgatactgatttgcga
gaaatgaagcaacgcatgacacgtttaatggaaaaaatggaagactgccaagagaaggct
tcacgagatttagatttggataagaattcttgggtaaaattggcaaatgtgccaaatttc
ggttataccctacgcataacgctaaaggatgatacggctttgcgcaagaacaaggattac
aaaattattgatgtcctcaggggtggtatacgcttcaccaccgacaagcttaccaaaata
aatgaagagtttgtggccctccgagaacaatatgaagaacaacaaatggcaattgtggag
gaaattattaaagtagctgttggttatgctgctccactgacaagtttgaataatgaattt
gcccagctggattgtttggttagttttggcatagtggcgcagtcagcacccataccctat
gtaagacctaaaatgttggaggagggttctggcgagctggtattgaaagatataagacat
ccctgcttggaactgcaagagcacatcaattttatagccaacagtgtagagtttaaaaaa
gatatctgcaacatgttgatcataactggccccaatatgggtggtaaatccacctatata
cgctcggtgggcacagccgttttaatggcccatgtaggcagttttgtgccatgttccgaa
gctacaatatctatggtggactccatacttggcagagtgggggccagtgataatatcatt
aaaggtctaagtacctttatggtggagatgatggaaacctcaggcattataagatctgcc
actgataaatctttggtaattatcgatgaactgggcagaggcacctccacttacgaaggc
tgcggcatagcatggtccatagctgaacacttggccaaggaaacaaaatgttttactttg
tttgccactcactttcatgaaattaccaatctttcggaaaccgtggacactgtcaaaaat
tgccacatggctgctgtggcagataatgaaaacttcaccttgctttatcaggtgcgtccc
ggtgtcatggagaagagttttggcattcaggtggcccgtttggcaaattttcccgaaaat
gtggtacaaaatgcccaacagatttacaatgaattcgaagatgaacatgctgccaagcaa
acggaagaggataaaggacttttggagaaaatcaataaagccattgaaaatctatccacc
accggcaataatgtggatatcaatgaaagtgatttatccaaattggtggaacaattcact
caggacataaaaaaattggatagtgaatatttcaaaagtgttctagccactgccggtggt
atggccaagtag
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