Stomoxys calcitrans (stable fly): 106082194
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Entry
106082194 CDS
T07664
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac04140
Autophagy - animal
scac04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106082194
04148 Efferocytosis
106082194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scac04131
]
106082194
Membrane trafficking [BR:
scac04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106082194
Hops complex
106082194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Spatacsin_C
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
106082194
NCBI-ProteinID:
XP_059219595
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Position
2:85518813..85530885
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AA seq
841 aa
AA seq
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MPIMYNTGDWFVLRPTTYRKLDLYTPEWPLDLDLEYMTVACAPYGGPIAVTRDPNKIVPV
KGTAKPLIRILDTAGQELGKVWWNHGRLISMGWSDAEELICVQEDALVFIYDMFGNEKES
YCISQEASETKVLDAKIFQSTAGTGIAVMTTKYRIFLKHTSSKDFRSRLLPEIPKSISNC
TCWEIVTEDRNSYCLLGREREIIKLFPGESVGSIIRNLFDKPFERIILMSVSYNHKNLAL
YTNNGIVWMGSIDMKQKYCEFDTGRKDVPKQIEWIMNIDNDQSEAIVISYPSFLLAVNVN
GDKNLFTYDPAIFLVAEMDGVRILTNTTHEMIQKLPKCVHNIFAINSQEPSSFLFEAQKK
FQEKSHQADEYLSLFRDRMNVAVDECVEAAGYEFCTTTQKCLMRTAYFGKGFIPSHNPDE
YIRMLRILRVLNALRDPRIAIPLTLKQFQHLHPEIILARLVFRKYYAIAIQVAKHLKLPE
SWILEHWAYHKVINDKNDIEVARKITEKFKNPSVEGISFCNIAEKAHSAGRDELAIKLLE
LEPRTSLQVPLLLKLGKYNRAVQSATQSGDTELVATVLLEIKKKMMLTNFHMIIREYPMA
LNIYKKIMNEWSRTALYDIYNSEDDQKSIAEYHFRNAIESNTLESNLSIIANSYTQGRRN
IEAELCSDTSKLMKLQKSLNNKYSSIYGHVTFLGLSIHETMERLLDLGELKEAEKIKSDF
KVPDRRYWWLRIINLSNKYKWEDLEKFAKSKKSPIGYEPFVEVCLKQNNLTEARKYIHKC
RDDRKPHWYIRAELYEEAVDSAFEQRDINALYVIQQKANSLGNRQLLDKINTYIPMLSSK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgccaataatgtacaatactggtgattggttcgttttacgaccaacaacatacagaaaa
ttagacttatacaccccggaatggccattagatctggatctggaatatatgactgtagcg
tgtgctccatatggtggaccgatagctgttaccagagatcccaataaaattgtaccggtt
aaaggaacagcaaaaccgctaatacgtattttggatactgctggtcaggagttgggaaaa
gtttggtggaatcatggtcgtctaatttcaatgggctggtccgacgccgaagagttgatt
tgtgtccaagaggatgccttagtgttcatctacgacatgtttggcaatgaaaaagagtcc
tattgcattagccaagaggctagcgaaacaaaggtactggatgccaagatctttcaatca
acagctggaaccggcatagcagttatgacaacaaaatatcgcattttcctcaaacatacg
agtagcaaggattttcgatctcgtctcttgcctgaaataccaaaatccatctccaactgc
acttgctgggaaattgtcaccgaagatcgcaacagctattgtcttttgggacgtgaacgt
gaaattattaaactctttcccggagaatctgttggctccataatacgcaatcttttcgat
aaaccatttgaaagaattattttgatgtccgtctcatataatcacaaaaatttggccctt
tatacgaacaatggtattgtatggatgggcagcattgatatgaaacaaaaatattgtgaa
tttgacacgggtcgcaaggatgtaccgaaacaaatagaatggattatgaacatagataat
gatcaatcggaggcaatagtaatttcatatccttcatttttgttagcagtcaatgtgaat
ggtgataaaaatcttttcacctatgatccggccatatttctggtggctgaaatggatggt
gttcgcattttgaccaatacaacacatgaaatgatacagaaactaccaaaatgtgtgcat
aatatttttgccattaatagccaggagccttcaagttttttgtttgaagcccaaaagaaa
tttcaagaaaaatctcatcaagccgatgaatatttgagtttatttcgcgatcgcatgaat
gtagcggtagatgagtgtgttgaagcagcaggctatgagttctgtactaccacacaaaag
tgtctgatgcgtactgcatactttggcaaaggttttataccttcccacaatccagatgaa
tacatacgtatgctaagaattttacgagtgttgaatgctctgagagatccacgtattgct
attcctttaacactaaaacaattccaacacttgcatccggaaattattctagcgcgtttg
gtttttcgtaaatactatgcaattgccatacaggtggcaaaacatttaaaactacccgaa
tcatggattctggagcattgggcctatcacaaagtgataaatgacaaaaatgacattgaa
gttgctcgaaaaattaccgaaaaatttaaaaatccatctgtcgagggtatatccttttgc
aatattgcagagaaggcacatagcgctgggcgcgatgaattggccattaagttattagag
cttgagccacgaacatcgctacaagttcctttgctgcttaaattgggcaaatataatcga
gctgtacaaagtgccacgcaatcgggtgatactgagctggtggccacagtattgctagaa
atcaaaaagaaaatgatgttaaccaatttccatatgataatacgtgaatatcccatggct
ttaaacatctacaaaaaaatcatgaatgaatggagtcgcactgccttatatgatatctac
aatagcgaagatgatcagaaatccatagctgaataccattttcgcaatgctatcgagagt
aatactttggaatccaatctatccataattgccaatagttacacacagggcagacgaaac
atagaagctgaactctgttcggataccagcaaattgatgaaattgcagaaatcgctaaac
aacaaatattccagcatttatggtcatgtaacattccttggattgtcaatacatgaaact
atggaaagattgctagatttgggagaactaaaagaagctgaaaagatcaaaagtgatttc
aaagtccctgatagaagatattggtggctacgaattatcaacttatccaacaaatacaaa
tgggaagatttggagaagtttgccaaaagcaaaaaaagtcccataggctatgagccattt
gtggaagtctgcctaaagcagaacaatttaaccgaagctcgcaaatacatacacaaatgt
cgagatgatcgaaaacctcattggtatataagagctgagctttatgaagaagctgtggat
tctgcatttgaacaacgtgatattaatgcactgtatgtgattcaacaaaaagcaaattca
ttgggaaatcgccagctattggataagataaatacatatattcctatgttgtcgtctaaa
aaatag
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