Stomoxys calcitrans (stable fly): 106082489
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Entry
106082489 CDS
T07664
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
scac
Stomoxys calcitrans (stable fly)
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scac03009
]
106082489
Ribosome biogenesis [BR:
scac03009
]
Eukaryotic type
90S particles
Other 90S particles
106082489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
S1_RRP5
S1
HAT_Syf1_M
TPR_19
ARM_TT21_5th
OB_RRP5_4th
DUF7017
UTP6_C
TPR_15
Motif
Other DBs
NCBI-GeneID:
106082489
NCBI-ProteinID:
XP_013100492
UniProt:
A0A1I8NZ65
LinkDB
All DBs
Position
2:complement(207201827..207206539)
Genome browser
AA seq
1414 aa
AA seq
DB search
MVIVEKSFPRGGIPASKEKAATTKLDGQIFGAVQRKIKKTKSKSSKKLSTVGDNQSEVLE
SFSAQTLSYETIQDGMIIMGIVKKVDQLYLSIALPGRITARVSALEISDSYTKATKEFLQ
NSTQSEGYKPLTDLYKVGQIVYGRVQELKTNERGQTLVDMSLKPTEVHADLNHSSVRKGF
VFNGAIEEVQEHGYIIESGIKGLRCFVPSDKAQEGHAVGEMVYLKVDKMTTDKSASTCIC
KEIQEAKLKVKDQNDPSLDYLLPSTIVNFQVSQRLKDGLKGTIMNEVFTAYVNEHQLGDA
LLGPDDYEINAKFEARILYVMPLTKLVYLTLKVQRNPEVKTEDTDNEESSTLKCGDVVEN
AKVHHLGTGGIILILNDTFKGMLSFKTIKSNYKGNYDQDELLAKYATKSTHKVRILDYDV
MDSLYICTDNTTAVNEKFFALEDFKPGDFLTAKVKQYNEKIGGYTLQVGMVTAIIEKLFL
APSIKMLEANSKLKCRIVAVKPERKMVYLTNRPEYLAKNCSILTSVNEAKVNGNYTGTVV
KCGSSFALVKFFGDVKGIFYRQNASPGQLENMEEGQTLQFRVASKQDDQLILGLVENTFK
LGEICPISIVHKLESGLEVKVSYGLEEGQEIEFKGLVPLRLLSNFVDLLLAKLQMYQIGE
QTKAVSTLNNVFSIRDVPYFTENATPNWKSVKVGDILKGYVKDVSDDVVEVMVPIKGYTK
TVKVHLNMMLMDVANSSKVSLTQDQVVFVKVLGKEDTTKTISVSAQLTDVWDGQMSTTSQ
FVKDYLDEVDAIRKSLKKQGNPIGRYSVGDKVTAKFQCVNETTGDWEYTLQKTQLIGIVK
STMVGKAKSPKPETSQDCVILWIDYSSNLLLLSNRQGDIDHILPGKGIPQNLVGKGGINA
KVLFKNESIFVCSLKKGKNPLVYCPSQLHFNDFEKTSSNAVEEGNFCKLTFIDDTIPIAV
LDDTFKIWLEVGKKRKLQKETAQVAEGPSAKKPKLEKEKQNKTERKRKDSDSKQEPPKKL
KQTIKDESNQSQLFYEDKTADRKAASKVVDTVTGTTVSDPKVAKSKPVAKTLAGVSNFWT
TDLSNISKNDESSEEEDEDENDDDDNKKSNDGKTKKKLTTAEKFKQQREEEARLRAIEEK
YADPNQLPDSVDQFDRLVLSDPNNSKHWINYMVYHLQSAEIDKARAVARRALKTITFRNS
DDQINIWVAMLNLELRYGSKESFNDILKEALMYNDPLKVYLRAVEIMTDAQKNQEVIEMI
GVITKKFKTEQEMWRVAANAFFTIDMPERAQQLLHRALTCLPERDHVNTIVMFANLNHKF
ENNEMAQTLLDQVVTSYPKRVDVWCQYVDMLVKADLVESARNILERAVVQKIPLRKMRTI
FKKYLEFEERFGNDTLVQRVKQLAIDYVKKNEHL
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggtcattgttgaaaaatcgtttcctcgtggaggaattccagcctcaaaagagaaagcg
gccacaaccaaattagatggacagatttttggtgcagtccaaagaaaaattaaaaaaacc
aaaagcaaatcttcaaaaaaattgtccaccgttggagataatcaaagtgaagttcttgaa
tccttttcagctcaaactctttcctatgaaaccatacaggatggcatgattatcatgggt
atagtcaagaaagttgatcagttgtatttgagcattgcattgccaggtcgaattaccgct
agagtatcggcgttggaaatatccgattcatacaccaaagcaacaaaggaatttctacaa
aactcaacacaatcggagggttataaacccttgacggacctctataaagtgggacaaatt
gtctatggtcgagtgcaagagctcaagaccaacgaacgaggacaaacactagtggatatg
agtttgaagccaactgaggttcatgctgatttaaatcactccagtgttcgcaaagggttt
gtgtttaatggagctattgaagaagtacaggaacatggctacattatagagagcggcatt
aagggtctacgttgttttgttccttcggataaggcacaagaaggacatgctgttggtgaa
atggtctatttgaaagtggataaaatgacaactgataaatcagctagtacttgcatttgc
aaagaaattcaggaggccaaactaaaagttaaagaccaaaatgatcccagcttggattat
ttgctgcctagcactattgtaaattttcaggtaagccaacgtttaaaggacggcctaaag
gggacaataatgaacgaagtattcactgcctatgttaatgagcaccaactaggggatgct
ttgttaggaccggacgactatgaaataaatgcaaagttcgaggcacgtatattatatgta
atgccgcttacgaaattggtctacctaacactcaaagtgcaacgaaatccggaggttaaa
accgaagataccgataatgaagaatcctcgacacttaaatgcggcgatgttgtggagaat
gctaaagtacatcacttgggcacaggtggaattatattgatattgaatgacacatttaaa
ggaatgctctccttcaaaaccattaaatcaaattacaaaggcaactatgatcaggatgaa
ctattggcgaaatatgccaccaagagtacacataaggtgcgtattctggactatgatgtc
atggattctctatacatttgcaccgataacacaactgcagttaatgagaaattctttgct
ttggaagattttaaacctggtgattttctaacagctaaagtaaaacaatacaatgaaaag
attggtggttatacactacaggtgggaatggttacagcaattattgagaaactttttctg
gcaccttccatcaaaatgcttgaagcgaattcaaaacttaaatgccgcattgttgctgtt
aaaccagaacgtaagatggtatatttaaccaatcgcccagagtatttggccaaaaattgt
tctatactaaccagtgtgaatgaggccaaagtcaatggcaactatactgggacagtggta
aaatgtggcagcagctttgctttggtgaagttttttggagacgtcaaaggaattttttat
cgtcaaaatgcttcccctggccagttggaaaacatggaagaagggcagactttgcagttt
cgtgtggccagcaaacaagacgatcaacttatattgggtttagtggaaaatacttttaaa
cttggcgagatttgtcccatatctattgtacacaaacttgagtcgggtctggaagtgaag
gtctcttatggtttggaagagggacaggaaattgagtttaaaggcctggttccattgcgt
ctgctatcgaactttgttgatttgctgcttgctaaactgcaaatgtatcaaatcggtgaa
caaaccaaggctgttagtaccctaaataatgttttcagcataagggacgtcccatatttt
accgaaaatgctacacctaattggaaatcggtaaaagttggtgatatacttaaaggctat
gtaaaagatgtctccgatgatgtagtggaagttatggttcccattaaaggctataccaaa
accgttaaagttcatttaaatatgatgctaatggatgtagcaaactcctcaaaagtttcc
cttactcaagatcaagttgtgtttgtcaaagtattgggcaaagaggatacaacaaaaaca
atttcggtttcggcacaattaaccgatgtttgggatggccagatgagcaccacatcgcaa
tttgtaaaagattacctagacgaagtggatgccattagaaaatctttaaagaaacaagga
aatccaattggccgttattctgtgggtgacaaagttacggccaaatttcagtgcgtcaat
gaaaccacaggtgattgggagtataccctgcagaagactcagcttattggtatagttaaa
tcaaccatggtgggcaaggccaaaagccctaaacccgaaaccagtcaggattgtgtgatt
ttatggatagactacagcagtaatttgctacttttgagcaataggcaaggtgatattgac
cacatactacccggtaagggcatacctcaaaacttggttggcaaaggtggcataaacgcc
aaagttttgttcaaaaatgaaagcatatttgtgtgttcccttaagaagggtaaaaatcct
ttggtctattgtccctcacagctgcactttaacgattttgaaaaaacctccagcaacgct
gtagaggaaggaaatttttgcaaattaacatttattgacgataccataccaatagcagtt
ttagatgatacctttaaaatatggttggaagtggggaaaaagagaaaattgcaaaaagaa
acagcacaagtcgctgagggtcccagtgccaagaaacccaaattggaaaaagaaaaacaa
aacaaaactgaaagaaaacgcaaagactcggattcgaaacaggaacccccgaagaaactt
aaacaaaccatcaaagatgaaagcaatcagagtcaacttttttatgaagacaaaactgca
gatagaaaggccgcatccaaagttgtagatactgtaacagggaccacagtaagtgatcct
aaggtcgcaaaatccaagccagttgccaagactctggcaggtgttagtaatttttggacc
acagatttatcaaatatatctaagaatgatgaatcttcggaggaagaggatgaagacgaa
aatgatgatgatgataataaaaagtccaacgatggcaaaaccaaaaagaaactaaccacg
gcagagaaattcaaacaacaaagggaagaagaagcccgtttaagagccattgaggaaaag
tatgcagatcccaaccaattacccgattcggtggatcaattcgacagattggtgctttca
gatcccaataacagcaaacactggattaactacatggtctatcatctacagtcagcggag
atagataaagcaagagctgtagctagacgtgcgcttaaaaccataacatttagaaattct
gatgatcagataaatatatgggtagcgatgctgaatcttgaattgcgttatggcagcaaa
gaatctttcaatgacattctcaaagaggcgcttatgtacaatgatcccttgaaggtctac
ctgagagcagtggaaattatgacagatgctcaaaagaatcaagaagtaatcgaaatgatt
ggtgtgattactaaaaaattcaaaacggaacaggaaatgtggagagtagcagcaaatgct
ttctttacaatagacatgccggaaagagcacaacagttattgcacagagctttgacgtgc
ctacccgaaagagatcatgtcaataccattgtaatgtttgccaacctaaatcataaattt
gaaaacaacgaaatggcacaaacgcttttggatcaagtagtcacttcgtatccaaaacgc
gttgatgtttggtgtcaatatgtggatatgctggttaaagcagatttagtggagtccgct
agaaacattctggaacgtgctgtggtacaaaaaattcctttgcgtaaaatgcgaacgata
ttcaagaaatatttagaatttgaagaacgttttggtaacgatactctggtgcaacgcgta
aaacaactggccatagattatgtcaaaaagaatgaacatctttga
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