Stomoxys calcitrans (stable fly): 106082614
Help
Entry
106082614 CDS
T07664
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
scac
Stomoxys calcitrans (stable fly)
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scac03041
]
106082614
03009 Ribosome biogenesis [BR:
scac03009
]
106082614
Enzymes [BR:
scac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106082614
Spliceosome [BR:
scac03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106082614
Ribosome biogenesis [BR:
scac03009
]
Eukaryotic type
90S particles
Helicases
106082614
Pre-60S particles
106082614
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_22
Motif
Other DBs
NCBI-GeneID:
106082614
NCBI-ProteinID:
XP_013100688
UniProt:
A0A1I8Q5V6
LinkDB
All DBs
Position
2:complement(29233151..29242361)
Genome browser
AA seq
665 aa
AA seq
DB search
MSIREKLLMKKIKKREKMKKELAQKKGAAKMKNQSLKNGNHDEVDNDFQEMPQQIPNKQQ
KQNKKKQQMQVVNSDSDSDDNDDDEEEEEEHDDDDDVSGEEEEDEQESGDDSEESDEDDE
EEVPAKKLKKDSSQKEKKPKKVETEGFDELDPTAAAEALSRRDNADRSFASLKGIVSDAT
LKAIEQMGFSDMTEIQAKSLPPLLQGRDLVGAAQTGSGKTLAFLIPAVELIYKLRFMPRN
GTGVIIISPTRELSMQTFGVLKELMAYHHHTYGLVMGGSNRQVENDKLSKGVNILVATPG
RLLDHLQNSPDFLYKNLQCLVIDEVDRILEIGFEEELKQIVNLLPKRRQTMLFSATQTEK
IDALSKLALKKEPIYVGVDDNKDTATVSGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMV
FFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAAEGILLCTDVAARGLD
IPQVDWIVQFDPPDDPKEYIHRVGRTARGTGSSGHALLMLRPEELGFLRYLKAAKVPLNE
FEFSWNKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKTIFDVNTLDLQTVA
KSFGFLVPPVVDLKVGAAKRQRPEKRVGGGGFGYYKNMNNDERKQRTFKQINREQLQKRG
KNFMR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtctatacgagagaaattgttaatgaaaaagattaaaaaacgtgagaaaatgaagaag
gaattagcccagaaaaagggagcagcaaaaatgaagaatcaaagtcttaaaaatggaaat
catgatgaagttgataatgatttccaggagatgccacaacagattccaaataagcaacag
aagcaaaacaaaaagaaacagcaaatgcaagtcgttaattcagattccgacagtgatgac
aatgatgatgatgaagaggaggaggaggaacatgatgacgatgatgatgttagcggcgaa
gaggaggaagatgaacaagaaagtggtgatgattccgaagaaagtgatgaagacgacgaa
gaagaagtcccagcgaaaaaactcaaaaaagattcttcgcaaaaagagaaaaagccgaag
aaagttgaaacagaaggctttgatgagctggatcctactgctgccgctgaagctttatct
agacgcgataacgctgatcgttcttttgcttcactcaagggcatcgtttcggatgctact
cttaaagctattgaacaaatgggtttctccgatatgactgaaattcaagcaaaatcctta
ccgccattactgcaaggtcgtgatttggtaggagctgctcaaacggggtcaggaaaaacg
ttggcctttttaataccagctgttgaacttatatacaagctacgttttatgcctcgcaat
ggtacaggcgttattatcatatctcccacacgtgaactttccatgcaaacctttggagtt
ttaaaggaattaatggcttaccatcatcatacctatggcttggttatgggtggatccaat
cgacaggtggaaaatgataaacttagcaaaggtgttaatattttagtagccactccggga
cgtttgctggatcatttgcaaaattctcctgatttcttgtataaaaatctgcaatgtttg
gtaatagatgaagttgatcgtattttggaaattggttttgaggaggagcttaaacaaatt
gtcaatttgttgccgaaacgtcgtcaaacaatgctattctctgccacacaaacggaaaag
attgacgccctctcgaaattggccttgaaaaaggaacccatttatgtgggtgttgatgac
aataaggacaccgccactgtaagtggcttggaacaaggttatattgtgtgtccttcggaa
aagcgtttattagtgctgtttacttttctgaaaaagaatcgcaagaagaaggtcatggta
ttcttttcttcctgcatgtctgtgaaatatcatcatgagcttttcaattacattgatttg
ccagtgacatcgatacatggtaaacaaaaacaaaccaaacgtaccacaactttcttccaa
ttctgcaatgctgctgagggtattttactttgtacggatgtagctgcacgtggtttggac
attccccaagtggattggattgtacaattcgatcccccagatgatccaaaagaatacatt
catcgtgttggtcgtactgctcgaggtactggcagttcaggtcatgccttattaatgttg
cgccctgaagaattgggtttcttgcggtatctgaaggcagccaaagttcccctaaacgaa
tttgagttttcatggaataagattgctgatattcaattgcagctggagaaacttattgcc
aaaaactatttcctaaatcagtcagccaaagaggctttcaaatcctatgtgcgagcctat
gactctcatcaattgaaaaccatcttcgatgtcaacactttggatttgcagacagtggcc
aaaagttttggattcctggtaccacccgtagtcgatttgaaggtgggagcagccaaacgt
cagaggccagagaaacgcgttggcggtggaggttttggctattacaagaacatgaataat
gatgaacgcaaacaacgtacttttaagcaaatcaatcgtgaacagttacaaaagaggggt
aaaaactttatgagataa
DBGET
integrated database retrieval system
