Stomoxys calcitrans (stable fly): 106083074
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Entry
106083074 CDS
T07664
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03013
Nucleocytoplasmic transport
scac03015
mRNA surveillance pathway
scac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106083074
09122 Translation
03013 Nucleocytoplasmic transport
106083074
03015 mRNA surveillance pathway
106083074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106083074
03041 Spliceosome [BR:
scac03041
]
106083074
Enzymes [BR:
scac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106083074
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106083074
Spliceosome [BR:
scac03041
]
Complex C
Other components
EJC/TREX
106083074
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106083074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
MoaE
AAA_19
Motif
Other DBs
NCBI-GeneID:
106083074
NCBI-ProteinID:
XP_013101358
UniProt:
A0A1I8PD82
LinkDB
All DBs
Position
3:57636979..57642334
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AA seq
423 aa
AA seq
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MADNDDLLDYEDEEQTETTVAETQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRSIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRE
LAFQISKEYERFSKYMPSVKVGVFFGGLSIQKDEETLKNVTPHIVVGTPGRILALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgatgatcttttggattacgaggatgaggagcaaactgagaccactgta
gcggaaacgcaagaggctcccaaaaaagatgtcaagggtacttacgtgtctatacacagt
tcgggttttcgcgattttctcctaaagccggaaattttaagatccattgtggattgtggt
tttgagcatccttcagaagtacaacatgaatgtattcctcaggctgtcttgggcatggat
attctctgccaggcaaaatctggtatgggtaaaactgctgtatttgtgctcgccaccctt
cagcagctggagcccaccgagaatgttgtctatgttctagtcatgtgtcatactcgtgaa
ttagcattccaaattagcaaggaatatgaacgtttttccaagtatatgccttccgttaag
gttggcgttttctttggcggtttgtccatacaaaaagatgaagaaacattaaagaatgtt
acaccccatatcgttgtcggcacaccaggacgcattttggctttgatacggaataagaaa
ttaaatttaaagcatctgaaacattttattctcgatgaatgtgacaaaatgttggaacaa
cttgatatgcgccgcgacgttcaggaaattttccgcagcacacctcacggaaagcaagtt
atgatgttttccgccacactaagcaaagacattcgtccggtttgcaaaaaattcatgcaa
gatcccatggaggtatatgtagacgatgaagccaagttaaccttgcacggtctgcaacag
cattatgtcaaactaaaggaaaatgaaaagaacaaaaagttattcgaacttttggatgtg
ttggaattcaatcaagtggttatattcgttaaatcggtacagcgttgtatggctctggct
caactcttgacagaacaaaatttcccagccattggcatacatcgtggcatgactcaggag
gaacgtcttaatcgctatcaacaattcaaagatttccagaaacgtattttggttgccaca
aacttgtttggccgtggcatggatattgaacgtgtcaatattgtttttaattacgatatg
ccagaggattccgatacttatttgcatcgcgtagctcgcgctggacgttttggtaccaag
ggtttggccattacatttgtttccgacgaagccgatgccaagattctgaatgaagttcag
gatagattcgatgttaacattacagaattgccagatgaaattgatttgtcatcctacatt
gaagggcgataa
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