Stomoxys calcitrans (stable fly): 106083301
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Entry
106083301 CDS
T07664
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106083301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scac03009
]
106083301
Ribosome biogenesis [BR:
scac03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106083301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_EML
Utp13
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
WD_LRWD1
RMC1_N
NBCH_WD40
VPS8_N
Beta-prop_WDR75_2nd
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
106083301
NCBI-ProteinID:
XP_059226358
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Position
5:complement(57749047..57751739)
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AA seq
786 aa
AA seq
DB search
MSLSINEKSYAVESRYSNFYSGGDVAWSRDGNWIFCLNGSEITKVDLETGLLNRSYGLNF
NESGEKVVSGKDEEDDDAIYCFDVSFNQEFMVTVHQSSLLRLWHLPTGKIEKLWKSQHKG
PVVKVTFSSDAKLVCTSGADSTLKIWDYENSRCVCALKDFTGPALLIKFHPCSGRTEIFA
AGADNVIYKWDYVKKTMEAKMKGHLSQVTDIDFSDSSSDCENLISVGRDKVVIVWNLANG
KQVKVIPLYEEIVGAFYIDAQNAVVAGLKGNIKEINCTTGKISSLLECQEEEYEIKTLLH
NRSTQQLAVVTNDQNILIFGIKPALKAVKQLIGFNDEILDICFVGESEQFLAVATNSKHI
KLYDIENHMNCSIIMGHKDTVMTLSSPGSSNLLLSAGKDFSIFLWTLDKVSGSLKCLTKN
LSSHTATIGCISFGFNCSTIFASVCQSGSMKIWSLNLKPKQQSHQFSVKCAVVAHDKEVN
SVTFSPNNKVIATASQDKTAKLWSADNHSIIGTLRGHTRGVWSVRFSPTDQIILTTSSDC
SLRLWSLTNLSCLKRLEQTSTVLRAEFLDHGKYILSSGSDGLLKLWNIKTNACIQTLDEH
EDRVWSLAVSARTQKYFFSAAADSKIIKWKDVTEEYKNSEIDKRQAEVLQEQSLQTLLHE
NKNLKKAFNLALKLGKPRVTYNILNQFIQKRDHETVANLILQLSDDRKNTLLDHVKVWSC
NARYSQVSNVVLQQLLNEMIVEPSLQRSLNAKNLVEVVTPYVQRHFKRVTELSKELHFLD
FIVQNI
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttagtataaatgaaaagagctacgctgtcgaatcacgttactccaacttttat
tctggtggagatgttgcatggagcagagacggaaattggatcttctgcttgaatggttct
gaaataacaaaagtagatttagaaacgggattgttgaatcgttcatacggcttaaatttc
aatgaaagtggagaaaaagtcgtcagtggtaaagatgaagaagatgacgatgccatctac
tgcttcgatgtatcttttaatcaggaatttatggtcactgtacaccaaagcagtttgctt
agactatggcacttaccaacgggaaagatagaaaagttatggaaaagccagcacaaagga
cccgtagtcaaagtgacatttagcagcgatgcgaaattggtttgcaccagcggagctgac
tcgacattgaaaatatgggactatgaaaatagtagatgtgtatgcgctttaaaggatttt
acaggacctgcactgctaataaaattccatccatgttctggcagaactgaaatattcgca
gccggcgctgacaatgtcatatacaagtgggattatgtgaaaaagacaatggaagctaaa
atgaaggggcatttgtctcaggtcaccgatattgacttctcggactcaagtagcgattgt
gagaatctcatatccgtaggaagagataaggttgtgattgtgtggaatttagcgaatgga
aaacaagtgaaggtaataccactctatgaggagatagtgggtgcattttatatagatgcg
cagaatgccgttgttgctggtctaaaaggaaatattaaggagattaactgtacaaccgga
aaaatttcttcgttattagaatgtcaggaagaggagtatgaaattaaaacattattgcat
aatcgctccacacaacaattggctgtagttaccaacgaccagaacatattgatatttggt
ataaagccagcgttgaaagccgttaagcaattaataggctttaacgacgaaatcttggat
atttgttttgtaggtgagtcggaacaatttcttgcagtagccaccaatagtaagcacatt
aaattgtatgacattgaaaatcacatgaactgttccataatcatgggccataaagacact
gtcatgacgctttcaagtcctggatcaagcaatctgttattgtctgctggcaaagacttc
agcatatttctgtggactctggacaaagtttctggaagtctgaagtgtctgacaaagaat
ttaagcagccacaccgctacgattggctgcataagttttggtttcaattgcagcactatt
ttcgcttccgtctgccaaagcggcagtatgaaaatctggtcgttaaatttgaaacccaaa
caacaaagtcaccagttttcggtcaaatgcgccgtagtggcacatgacaaagaagtaaat
agtgtaacgttttcacccaacaacaaagtcatagcaactgcttctcaggacaaaacagcc
aaattgtggtctgccgacaaccatagtataattggcactctacgaggacatactcgaggt
gtatggagtgtgcgattttcgcccactgatcagataatattaactacatcttcggattgc
agcttgcgtttgtggtctttaacaaatttatcgtgtcttaaacgtttagaacaaacctca
actgtcttgagggcggaatttttagatcacggcaaatacatattatcctctggatctgat
ggcttattaaagctttggaatataaaaacaaatgcttgcattcaaacgctcgatgaacat
gaggatcgtgtatggtccctagcagtatcagcaaggacacaaaaatatttctttagtgct
gctgcagattcgaaaattataaagtggaaagatgtcactgaagagtacaaaaatagcgaa
attgataaacggcaggccgaggttctccaagaacaatcacttcaaacgctattgcatgaa
aataaaaacttgaaaaaagcattcaacctggccttgaagttaggcaaacctcgtgtaacg
tacaatattttaaaccaatttatacaaaaacgagaccatgaaacagtagctaacttaata
cttcaactgagtgatgacagaaaaaatactcttttagatcatgtcaaagtatggagttgt
aatgcgcgttattcccaagtttccaatgtagtattgcagcagctattgaatgagatgatc
gttgagccgtcattacagcgttctctaaatgccaaaaacttagtagaagttgtaacgcct
tatgtccaaagacattttaagagggttacggaacttagtaaagaattacattttttagat
tttattgttcagaatatttaa
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