Stomoxys calcitrans (stable fly): 106084392
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Entry
106084392 CDS
T07664
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106084392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106084392
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106084392
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106084392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106084392
NCBI-ProteinID:
XP_013103492
UniProt:
A0A1I8PC96
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Position
3:184353388..184374266
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AA seq
924 aa
AA seq
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MAATRRLQGEIDRCLKKVAEGVETFEDIWKKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASAEIKDKSSLLENRRLIETQMERFKIVERETKTKAYSKEGLGAAQKMDPAQRI
KDEARNWLTNSISSLQIQIDQYESEIESLLAGKKKRLDRDKQERMDELRSKLDRHKFHVT
KLETLLRLLDNDNVEAGQVNKIKDDVEYYIDSSQDPDFEENEFIYDDIIGIDDVEYSGTG
VSLGIPSSATTDSNNSNETSGSPSSITSGGSPVQSPLPSQQQRDQQQQASNTSGSGGGSA
HQQINLNYSSDSTAADGTAKDKHNKNESNNNSKAKQPVKPTAVRANNKGAIGASDVTVAK
IISSTPSKNPHQQQQQQQQQQQQHHPTQQPTAAAVVAASVIVGNHTSSNNINTSSGATTL
AAAVAAAGHNPSVQQHAPAPTLQGNPTLASVAASSTNSSNATQIQGQSVIQATPTIAFSA
VAKHNTSLLENGPVLAASYAIVGSSAQQQQLTNLQANSSHLQNAHNTSNNSAVGSIANVV
QQGANAASVNNLVTSVANCISPNGMSGLQQVLNAQQQGILGLGGTNTNARASPGLLSPKH
MNGNSVDAISLKTMAQEAINRSVIDTNSLSQQQASSMDNRQQQQQQQQQQQQQQQQQVLQ
QHFTSETTANTLQQQANTATALAAAVAASTNGPSSVSVVGSNGGGSGVVGGGAGSGGSGV
VGPIGSSLNASALTNAAGQQPIGAGASSANSKQLAQQPTNEAHIPPLLGVAPLGPSPLQK
EHQLQFQMMEAAYYHLPSPNDSEKLTTYYHRTPVPTPPHYPQQQLPIYDTVEFYQRLSTE
TLFFVFYYMEGSKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINDDYEQGTYIYFDY
EKWSQRKKEGFTFEYKYLEDKELN
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaggttgcaaggtgaaattgatcgatgtctgaaaaaagttgcggaa
ggtgttgaaacatttgaggatatatggaaaaaagtacataatgccaccaacagtaatcaa
aaagaaaagtatgaggccgatctcaaaaaggaaattaagaagctacaaagacttcgcgat
caaataaaatcttggattgcatcagcagaaatcaaggataaaagttctcttcttgaaaat
agaaggcttattgaaacacaaatggaacgtttcaaaattgtcgaacgagagacaaaaaca
aaagcctactcaaaagaaggtttgggtgctgcacaaaaaatggatcctgcccagcgaatt
aaggacgaggcccgcaattggttgacgaattccataagctcattgcaaatacaaattgat
cagtacgaaagtgagattgaatcattgctggcaggcaagaaaaaacgtctggatcgagac
aaacaggaacgcatggatgaattaaggtcaaaattggatcgtcataaatttcatgtaaca
aagttggaaacgctattacgtctgttggataatgataatgtggaggcgggacaggtcaat
aagatcaaagatgatgttgagtactacattgattcatcacaagatcccgatttcgaggag
aacgaattcatatacgatgatattattggcatcgacgacgttgaatattcaggtacaggt
gtctcccttggtattccatcatcagcaacaaccgacagtaataatagtaacgaaaccagc
ggctcaccaagtagtataacatccggcggcagtccagttcaatcgcccttgccctcacag
cagcagcgggatcaacagcagcaggcctcaaacaccagcggcagtggaggaggatcggcc
catcagcaaatcaatttgaattattcaagcgattcaacagcagccgatggcacggccaag
gataaacacaataagaacgagagcaacaacaacagtaaagccaagcaacccgttaaacca
accgctgtacgagctaataataaaggggctatcggagcatcagatgttaccgtggcgaaa
attattagttctacgcctagtaaaaatcctcatcaacagcagcagcagcagcaacaacaa
caacaacaacatcatcctacacaacaaccaacagcggccgcagtcgtggcggcctccgtt
atcgttggcaatcatacaagttcgaacaacataaatacatcaagcggagcaacaacgtta
gctgctgctgtagcagctgcgggtcacaatccatcggtacaacagcatgcgccagcgcct
acgttacaaggtaatcccacattagcgtctgttgcggcatcatcaacaaattccagcaat
gcaacacaaattcaaggccaatctgtgattcaagctacacctacaattgcgttttcagca
gttgctaaacataatacatcacttcttgaaaatggtcctgtgcttgcagcgtcctatgct
attgtcggtagttcagcacagcaacaacaattaacaaatcttcaagctaattcctctcat
ttacaaaatgcccacaatacttccaataattctgcggtaggtagcattgcgaatgtagtg
cagcaaggagcaaatgcagcgagtgtcaataatttggtaacaagcgtggccaattgcatt
tcacccaatggtatgagcggtttgcagcaggttcttaacgcacagcaacaaggtattctg
ggattaggtggaacaaatacaaatgcccgagcttcaccgggactgctgtcgcccaaacac
atgaacggaaattctgtggatgctatctcattgaaaaccatggctcaagaagccatcaat
cgatctgtgatcgatacgaatagcctttcacaacagcaggcatctagtatggataatagg
caacaacaacagcagcagcagcagcaacaacagcagcagcaacaacagcaagtactacaa
cagcatttcacatccgagacaactgccaatacacttcagcaacaagcgaacacagccacg
gctcttgccgctgctgtagcagcctcaacaaatggcccctcatcggtgtcggtggtcggc
agtaatggtggtggtagtggtgttgttggtggcggcgctggtagcggcggcagcggggta
gtcggtcccattggtagtagtttaaatgcatcggctttaacaaatgctgccggtcagcag
cccataggcgcaggtgcatcatctgcaaatagtaaacaattagcccaacagcccacaaac
gaagcacacataccaccactgcttggtgtggcaccattaggcccctcacccctacaaaaa
gaacatcaacttcaattccaaatgatggaagccgcctactatcatctaccatcccctaat
gattctgaaaaactaaccacatattatcatcgtacgccagtgccgacaccaccgcactat
ccacagcaacaacttccaatctacgataccgttgaattttatcaacgtctctcaacggag
acactattctttgttttttactacatggaaggatcgaaggctcaatatttggcagctaag
gcattgaaaaaacaaagctggcgtttccatacaaaatatatgatgtggttccagcggcat
gaggaacccaaaattatcaatgatgattacgaacaaggtacgtacatctattttgattat
gaaaaatggagtcaacgaaaaaaggaaggattcacttttgaatacaagtacttagaagac
aaggagctaaattga
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