Stomoxys calcitrans (stable fly): 106084475
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Entry
106084475 CDS
T07664
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03013
Nucleocytoplasmic transport
scac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106084475
03015 mRNA surveillance pathway
106084475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106084475
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106084475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
ExoU_C
Motif
Other DBs
NCBI-GeneID:
106084475
NCBI-ProteinID:
XP_013103631
UniProt:
A0A1I8Q7I7
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Position
2:125551006..125555311
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AA seq
850 aa
AA seq
DB search
MDDSLTDEDEDDLSETDDDDEEEDDEGVEDDITPQEKVDAEAQKKVDEDRSNPQYIPKRG
TFYEHDDRTAEVEGECIEIEGPEDVEGQAIANGGSGGNAAGTKSSATTTISSASKTMKKW
QPASGVDRWSHDRFDPSEQAPKSRTELVSAYGYDIRTEDAPPKARRRRRYGRGPSKYNRN
WEDESAYLKTNNKERKPPKPSDFPALNENSGKQRRSSGRTQEEKENRMERRRREGRSDRS
ERQGSSRSNYQDDYNDRKERGDGGGPKNAKFKSNFSRQNQATVGRQAAMEFKQKNRQTHQ
SNTTPSNQGSTSSNLSNRLEAHRQPNHNQYQGQQNNKSPPSGSSVGKQQNQSVAQHQHND
SYNKKKNFDQGHQQPTQASPQTVATIQQSNQQQPQTSSLNHSLNRQQNAPLQAKTTQMPS
TNLSQRLQQVQNRNDPSHVGSVQMHALASQNQQQQQLMQHQQSPNMMMTAAAPQQVINQA
QAQEQRGPPKRYSSLRRSQHESQHIAEHQQLQQLHMQQQTAAPPPLLLPADQAMLQANLM
QMYHQENMQAQMQALQVSQQPNVPKQAAYAPAGPPTQPPGPYPGAAAGTPAAYYVAPDAY
TAATAAQATQATYAAQQAAPNYMAQQQTAATLAYANAAPNPQQTAPPTSAFGATPNVGVV
PQANPGANTAANYQNYNTVGGTTYFVPPPTQTANRPVPLPQRRPTNAIPILPPSEKNKPL
SVQQKTHDTKDDSKSSTSTTNQTTSAPIGSAENIDHIIDNMFVQRPAFQPPANAAATSSA
AATSSKPVANESSTMSSSSSSSLAADNSNASPNVASSTDSSNTPSQISEKLTNDAATTEI
SNNNPISTQE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagtttaacagatgaggacgaggatgatttatcagagactgatgacgacgac
gaggaggaggatgacgaaggcgtggaggatgatatcacgccgcaggagaaagtcgatgcg
gaagcccaaaagaaagtagatgaggaccgtagtaatccacaatatattcctaaaaggggt
accttttatgagcacgatgatcgtactgctgaagtagagggtgaatgcattgaaattgag
ggaccagaagatgtagaaggtcaagccattgcaaacggtggttctggaggaaatgcggct
ggaaccaaatcatctgccacaactaccatatcatctgcatcaaagactatgaaaaaatgg
caaccagcttcaggagtcgaccgttggtcacatgatcgctttgatccttccgagcaggct
ccaaaatctaggacagaattggtttctgcatatggttatgatatacgtacagaggatgcg
cctccaaaagcccgcagaagacgccgttacggcaggggaccaagtaagtacaaccgcaac
tgggaagacgagagtgcctacctgaagacaaacaataaagagcgaaaaccaccaaagccc
tcagactttccagctttaaatgagaattcaggaaagcagaggcgttcatcgggtcgcaca
caggaagaaaaggagaatcgtatggaacgtcgtagaagggagggtagatctgacagatcc
gaaagacagggttcttcaagaagtaattatcaggatgattacaatgaccgcaaagagcgt
ggtgatgggggagggcctaaaaatgcgaaattcaaatctaattttagtcgtcaaaatcaa
gcaacagttggcagacaggccgccatggagtttaagcaaaagaatcgccaaacacaccaa
agcaatacgactccctccaaccaaggcagtactagcagtaatttgagtaatcgtttggaa
gctcatcgtcaacctaatcacaatcaataccaaggtcagcagaataataaaagccctcca
tctggcagtagtgttggaaagcagcaaaatcagtcagttgctcaacatcaacataatgat
agctataacaaaaagaagaatttcgaccagggacatcaacaaccgactcaggcttcgcca
caaactgttgcaacaatacagcaatccaatcagcagcaaccacaaacgtcttcactaaac
cattcgctaaatcgacagcaaaacgctcctttgcaagcaaagacaacccagatgccaagc
acgaatttatcgcaacgtctgcagcaggtacaaaatcgtaacgatcccagtcatgtggga
agtgttcaaatgcacgcattggcctcccaaaatcaacaacagcaacagcttatgcagcat
caacagtcccctaatatgatgatgactgctgctgctccccaacaagtgataaatcaagca
caggcacaggaacaaagaggaccacctaaacgttactcgagcttgcgccggtctcagcac
gagtctcaacatattgccgaacaccaacaactgcagcaattacatatgcaacaacaaaca
gcggctccgccgccattgttattgcccgcagatcaagccatgctacaagcgaatctcatg
caaatgtaccatcaagaaaatatgcaggcgcaaatgcaagctttgcaagtgtcacaacaa
ccaaatgttcccaaacaagccgcctatgcacccgcgggtccgccaacacagccgcctgga
ccatatccaggggcagcagccggtacaccagcggcatattatgtcgcccccgatgcatac
actgctgccactgcagcacaggccacacaagcgacatatgcagcccaacaggctgcgcca
aactatatggctcagcagcaaaccgctgcaactttggcatatgcaaatgccgcacccaac
ccacagcaaactgcgccaccaacgtcagcatttggagcaacaccaaatgttggtgtagtg
ccgcaagcaaatcctggagccaacacagcagcaaactatcaaaactacaataccgttggt
ggtaccacatattttgtgcctccacctacccaaaccgctaaccgacccgttccattaccc
caacgaagacccactaatgctattcccatactgccaccatcagagaaaaataagccttta
tccgttcagcaaaagacacatgacacaaaggacgattcgaaatcgagtacttcaacaaca
aatcaaacgacatctgcacccattggtagtgctgaaaacattgatcatataattgacaat
atgtttgttcaacggccagcgtttcaacctccagcaaatgcagcggcaacttcttcagcg
gcagccaccagtagcaaaccagttgccaatgaatcgtcaacgatgtcgtcgtcgtcatca
tcatcattggcagcagacaattcaaatgctagcccaaatgttgcttcctcaacagatagc
agtaatactccaagtcagattagcgaaaagcttacaaatgatgcggccacaactgagatt
agtaacaataatccaatatcaacacaagaatga
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