KEGG   Stomoxys calcitrans (stable fly): 106085587
Entry
106085587         CDS       T07664                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
scac  Stomoxys calcitrans (stable fly)
Pathway
scac03013  Nucleocytoplasmic transport
scac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106085587
  09122 Translation
   03013 Nucleocytoplasmic transport
    106085587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scac03019]
    106085587
   03041 Spliceosome [BR:scac03041]
    106085587
Messenger RNA biogenesis [BR:scac03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     106085587
Spliceosome [BR:scac03041]
 Complex C
  Other components
   EJC/TREX
    106085587
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106085587
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_Aladin ANAPC4_WD40 EIF3I Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_NOL10_N eIF2A Beta-prop_Vps41 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Tricorn_2nd WD40_MABP1-WDR62_1st RMC1_N Beta-prop_WDR35_TULP_N DSE1_N Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th NBCH_WD40 PD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_SCAP TRM82_WD CFAP251_N PAC11 Beta-prop_ELP1_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 WD40_RFWD3 B-prop_COPA_B_2nd DPPIV_N Beta-prop_WDR41 Beta-prop_Nup120_160 baeRF_family5
Other DBs
NCBI-GeneID: 106085587
NCBI-ProteinID: XP_013105354
UniProt: A0A1I8QAE0
LinkDB
Position
2:complement(138629071..138632982)
AA seq 322 aa
MGRANAVVEEELRNYFKSHSKIREQKAHTSKVHSVGWSCDGRRLASGSFDKTVAVYTLER
DRVSKENTYRGHSGSVDQLCWHASNPDLLSTASGDKTVRIWDIRAGKCSSVTNTKGENIN
ITWSPDGKTIAVGNKEDLVTFIDTRTNKIRAEEQFNFEVNEIAWNNSSDLFFLTNGMGCV
HILSYPSLELQHILKAHPATCICIEFDPTGKYFATGSADALVSLWDANELACLRVLSRLD
WPVRTISFSYDGKLIASASEDLLIDIAHTETGEKVADVSVDAATFTVAWHPKQYLLAFAC
DDKDSNDRRREAGNLKVFGFQE
NT seq 969 nt   +upstreamnt  +downstreamnt
atgggtcgagcaaatgcagtagttgaggaggaactccgaaattattttaagtcacatagc
aaaataagagaacagaaagctcatacatccaaagttcattctgtaggttggagttgcgat
ggccgacgtctggcatccggttcatttgataagactgtagctgtttatactttggaacgt
gatagagtgagtaaagaaaatacatatcgtggccatagtggttctgtggatcagctgtgt
tggcatgcttcaaatccggatttattaagcactgcgagtggagataaaactgttcgaatt
tgggatattagagcaggcaaatgttcatctgttaccaatacaaagggagaaaacattaat
ataacttggtcccctgatggcaaaaccatagctgtaggaaataaggaagaccttgtgact
ttcattgacacaagaacgaataaaattcgtgcggaggaacagtttaattttgaggtgaac
gaaattgcctggaataacagcagtgatcttttctttctcaccaatggaatgggttgtgtt
catatacttagctatcccagcttggaattacagcatattttaaaagcacatcctgccaca
tgcatatgtattgagttcgacccaacaggaaaatattttgcaacaggttcggccgatgct
cttgtgtctttgtgggacgcaaatgaattagcatgtttgcgggtattgtcgcgattagat
tggccagtgagaactatttcatttagttatgatggcaaacttattgcgtccgcatctgaa
gatttgcttattgatattgctcacacggagacgggagaaaaagttgccgacgtatctgtg
gatgcagccacgtttacagtcgcatggcacccgaagcaatacctattagcattcgcttgt
gatgacaaggacagtaatgatcgacgccgcgaagccggtaatttaaaagtttttgggttt
caagaataa

DBGET integrated database retrieval system