Stomoxys calcitrans (stable fly): 106086296
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Entry
106086296 CDS
T07664
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac04145
Phagosome
scac04512
ECM-receptor interaction
scac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106086296
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106086296
09142 Cell motility
04820 Cytoskeleton in muscle cells
106086296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scac04131
]
106086296
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scac04147
]
106086296
00536 Glycosaminoglycan binding proteins [BR:
scac00536
]
106086296
Membrane trafficking [BR:
scac04131
]
Endocytosis
Phagocytosis
Opsonins
106086296
Exosome [BR:
scac04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106086296
Exosomal proteins of colorectal cancer cells
106086296
Exosomal proteins of bladder cancer cells
106086296
Glycosaminoglycan binding proteins [BR:
scac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106086296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF_MSP1_1
hEGF
EGF
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
106086296
NCBI-ProteinID:
XP_059221087
LinkDB
All DBs
Position
3:complement(193910903..193991986)
Genome browser
AA seq
1052 aa
AA seq
DB search
MNWLSLTALTALLCLAQVASLSLDPVASSELEQHIKKGDCVISMRHIRPRRKLHISIEAL
FMIDFPTLKHKMSFFLDRKQQRVTLDISAGGEIESLHFDIPQINETSTIRSLALHFHKNR
ISLLVDCKETSSHEIEMNLTKLYTQMDDPVVKLFRERKYPLHFDGNVDGALQRANCQKGL
SRRGNRRMLKNKISEREKNKKRDVRNWYNQEPGTSSEHYRQQEIPLDLDRRGDIPILSGD
CEDALAKSLSDLMALVKLLREDVAHQRQEIAYLRMLLENCAGCKEPKGDNNIEPTCRTSS
PCYPGVECYDFVSGPRCGRCPSGMVGDGKICKPGVTCADRPCYIGVQCHDTVNGAQCDPC
PLGFDGDGRSCTKQRSPCLDSPCPAGSKCTESLISPYYRCISCARGEQLNGTKCVDVDEC
EMYRPCDMLSTCVNQSPGFRCEPCPLGYEGMHAYGYYGEYWSTSYQRQTCVDVDECQTGI
GRCMANSVCVNTIGSYQCHCREGYKMNGTSCNPVAGLCPDGTICDSNAMCILSDNFKYRC
KCHVGWAGNGFICGRDQDLDSWPDHQLPCADPHCSQDNCPHLPNSGQEDSDHDGIGDGCD
DDADGDLITNDKDNCPFVYNSDQLDSDHDGVGDACDNCPFVPNRKQLDTDNDGLGNDCDD
DIDNDTVVNAYDNCMLVPNLNQLDFDGDGIGDVCDNCPSISNPSQEDRDNDLLGDACDSE
IDGDNDGIQDSEDNCPMVSNADQLDTDGDGKGDACDDDMDGDGIPNYRDNCPLAKNPNQL
DMNNNGKGDLCEYDEDDDGTPNIIDNCPNNSMIYSTDFRAIRSVILDPEGEAQLDPNWEV
HANGSEIIQTLNSDPGLVVGHDAFGGVDFEGTFYVNDDTDDDYVGFIFSYQSNRKFYIVM
WKKNTQTYWHSTPFRASGEPGIQIKLVDSVTGPGSMLRNSLWHSGDTKDQVRLLWKDPKN
MGWKEKTSYRWSLIHRPAIGLIRLRMFEGDKLVLDSQNVYDSTLKGGRLGAFCFSQQMII
WSDLIYKCNNRLPALVYNDLPSHLKQKAEIDR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgaattggttaagtttaaccgcattaacggcgctgttgtgccttgcccaagtggcgtca
ctgtctttggatccagtggcctcctctgaactggagcaacatatcaaaaagggcgattgt
gtgatatccatgcgtcacataaggcctcgacgtaaactacacatatccatagaagccctt
ttcatgatcgattttcccacgctgaagcataaaatgtcctttttcctggatcgcaagcag
caacgtgttacattggacataagcgctggtggtgaaatcgaatctttacacttcgacata
ccacagatcaatgagacgagtaccatacgatcattggccttgcatttccataagaatcgc
atatcactattagtggactgcaaagaaacctcctcgcatgaaatcgaaatgaatctaacg
aagctatatacgcaaatggatgatcctgtggtgaaattgttccgcgagcgtaaatatcct
ttacattttgatggcaatgtagatggtgccttgcagagagccaattgccaaaagggccta
agtagacgaggcaataggcgtatgctgaaaaataaaatttccgaaagagagaaaaacaag
aaacgcgatgtgcgcaattggtacaaccaagaacctggcaccagttctgaacattatcgc
cagcaggagattcctttggaccttgatcgtcgtggtgacattcccatattgagtggcgat
tgtgaagacgccctcgcaaaatcactgagcgatttaatggctttggtaaaattgctacgc
gaagatgtcgcccaccagcgccaagaaattgcctatctgcgcatgctccttgagaattgt
gccggttgcaaggagccaaaaggtgacaacaacattgagcccacatgccgcacctcaagt
ccttgctatccaggcgttgaatgctacgattttgtgtcaggacctaggtgtggtcgctgt
ccatcgggtatggtaggtgatggcaaaatatgcaagccaggagtcacctgtgccgatcgt
ccctgttacataggcgttcagtgtcacgataccgtgaatggtgctcaatgtgatccttgt
ccccttggctttgatggagatggacgctcgtgtactaaacagcgtagtccctgtttagat
tcaccttgccctgctggttccaagtgcacagagtctctaatttctccctattatcgttgc
atctcatgtgcccgtggtgagcaattgaatggcaccaaatgtgttgatgtcgacgaatgt
gaaatgtatcgaccttgcgatatgctctcaacttgtgtcaaccaaagtcccgggttccga
tgtgagccatgtcctttgggctatgagggaatgcatgcctatggttattacggtgaatat
tggagtacttcatatcagcgtcagacctgtgtggatgttgatgaatgccaaactggcatt
ggccgttgtatggccaattcggtgtgtgtgaataccattggttcctaccaatgtcattgt
cgcgagggttataaaatgaatggaaccagttgcaatccagtggctggcctttgccctgat
ggcaccatttgtgacagcaatgccatgtgtatactctcggataatttcaaatatcgttgc
aagtgtcatgtaggctgggctggcaatggtttcatatgtggccgcgatcaagacttggac
agttggcccgatcatcagttgccctgtgccgatccccattgcagtcaagataattgtccc
catttacccaattcaggacaagaggacagtgatcatgatggcattggagatggttgtgat
gatgatgccgatggtgatcttataaccaatgacaaggataactgcccgtttgtttataac
tcggatcaattggattcggatcatgatggtgtgggtgatgcctgtgataattgtcctttt
gtgcccaatcgcaagcaattggatacggataatgatggcttgggaaatgattgtgatgat
gatattgataatgacaccgtggtcaatgcctatgataattgtatgttggtgccgaatctc
aatcagctggattttgatggcgatggcattggagatgtatgcgataattgtccttcaata
tcgaatccttcacaagaggatcgtgataatgatctattgggagatgcttgtgatagtgag
attgatggtgataatgatggtatacaggattcggaggataattgtcccatggttagcaac
gctgatcaattggataccgatggtgatggcaaaggagacgcttgcgatgatgatatggat
ggtgatggtatacccaattacagagataattgtcctttggccaaaaatcccaatcaattg
gatatgaataataatggcaaaggcgatttgtgtgaatatgacgaggatgacgatggcact
cccaatatcatagacaattgtcccaataattccatgatatattcaaccgatttccgcgcc
atacgctccgtcattctagatcctgagggtgaggcccagctcgatcccaattgggaagtt
catgccaatggctcggagattatacaaaccttgaatagtgaccctggtctggttgtgggc
catgatgcctttggcggtgtggactttgagggcactttctatgtcaacgatgacaccgac
gatgattatgtcggctttattttcagctatcaaagcaatcgcaaattctacattgtcatg
tggaagaaaaatacccaaacctattggcattccactccattccgtgcttccggtgagccg
ggcatacaaattaaattggtagatagtgtaactggtccgggttccatgttgcgcaatagt
ctgtggcatagtggtgacaccaaggatcaggtgcgcctgctgtggaaggatcccaagaat
atgggttggaaggagaagacttcctaccgttggtctctgatacatcgtcctgccattggt
ctcatacgtctgcgaatgtttgagggcgataagttggtgttggattcgcaaaatgtctat
gactccaccttgaagggcggacgtttgggagccttctgtttctcgcagcaaatgatcatt
tggtcagatcttatatacaagtgcaacaatcgcctgcctgctttggtctacaacgacttg
ccttcacatttgaagcaaaaggcagaaatcgatagataa
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integrated database retrieval system
