Stomoxys calcitrans (stable fly): 106087145
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Entry
106087145 CDS
T07664
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03013
Nucleocytoplasmic transport
scac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106087145
03015 mRNA surveillance pathway
106087145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106087145
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106087145
mRNA cycle factors
P-body specific factors
106087145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
QIL1
Motif
Other DBs
NCBI-GeneID:
106087145
NCBI-ProteinID:
XP_013107526
UniProt:
A0A1I8PTW1
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Position
4:150018755..150023068
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AA seq
1181 aa
AA seq
DB search
MVEEKDLEGSEADTKEMEAAPDPAEVERQEKEELNAFLTELKSKITAKSHLRYENTNFDL
PEESYFAKLDSSLKRNTAFVKKLKQFTAAQLDSLMKDMKGLNLSKYISEICSALSEAKIK
MTDVPAVVMLCSKLHQTYADFDNEFFEAWQKTLQLKPGEKIANASKLRVDLRLFAELVSS
GVINSKQGLGLLGNVLTNVISQDKEDHSNFSIILSFCRHCGEEYAGLVPTKMINLAAKYG
GQIPKSDFLAPDKQQNLKNLLKDYFKYLCKYLLAEQAELMNMTNNLKKAMASKGEISTKT
KEKCELMQANFDKLLSSAQTLSDLLDEPLPELAKEIEICNPGAVIENMMDEAALGELDPW
GDEETKSFYVDLPDLRQFLPNFSAPKIDPEQIEDTSVMTEEALDAEIDNDLDLDDPPSTA
SDPANDKDDKDIDEVTGAGALPDKIGNALMEAGRMSNQSAGSIKQQFAQFLKNLNNCVNK
ELIDSAAIEFLLNYNTKNNRKKLTKSIFAVHRNRLDLLPFLSRFVAIVNLCNTDVALDLS
ENLRKEFKWHIRMKNQLNIESKIKIVRFMGEMVKFGLLKKFDALSCLKILLRDFQHHQIE
MACAFIEVAGVYLYNCKDTRWLMNTFLDQMLRLKTATALDSRHAAQVENVYYLVKPPETI
KQDVVLRPPIHEYIRHLVFEELNKQNVERSIKMLRRINWNDPTVSSYVIKCLSKAYLLRF
PLIRCLADLLSGLSSYQERAVTMVIDNVFEDIRAGLEIHSPKLAQRRIAMAKYLGELYNY
KLVESNNILNTLYSIISLGVSTEEGVVSPLDPPDSLFRLKLACVLLDTCGPYFTSSTSKQ
KLDYFLVFFQNYYWYKKSNPIFSRVQDTHDLFPIIVDHMYRECLANVRPKLKLYKSLEQA
KEAIEKLKEKLYPQLKEITAQSCEESSNLQSIPEDSEFDDGASDDSSSEMDRRPRDEVAD
DEDAANQANTTDWTENEGMPEDECIMVPKIPEKTKEDLEFEQMFEKMAQDSYQERLKETV
KPNTKDIPVPMMVRNNKKSYEQIASMPTTATSQQSTTTAGDTSKPNSSAAGGAGAATGAG
PINFVLMVRGGKGGKQQFKQFVAPSDSQLAINLKLQEEKIREEKEKVKRLTLNITERIEE
EDYQESLMQSQRSSQTNLYARPSKPKFKHQKGAPDVDLIFH
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggaaaaagacttggaaggtagtgaagcggataccaaggagatggaggccgct
cccgatcccgcggaagtagaacgtcaagaaaaagaagaactaaatgccttcctcacagaa
ttgaaatccaaaattacagcaaaatcccatttgcgttatgagaacacaaatttcgatttg
ccagaagagtcctattttgccaaactggattccagcctaaaacgcaacacggcgtttgtc
aagaaacttaagcaatttacagcagctcagttggattccctaatgaaggatatgaagggc
ctgaatttaagcaaatacatatcggaaatatgttcagcattgtccgaagccaagataaaa
atgactgatgtacccgctgtggtgatgttgtgctccaaactgcatcaaacctatgcagat
ttcgataatgaattctttgaggcttggcagaaaactttgcaactaaaaccaggagagaaa
atagccaatgccagcaagctgcgagtggatttacgtttgtttgccgaactcgttagctcg
ggcgttattaatagcaaacagggtttgggactgctgggaaatgttctcaccaatgtcata
tcgcaagataaggaagatcacagcaatttctcaataattttgtcattttgtcgtcactgc
ggtgaggagtatgccggcctggtgcctacaaaaatgatcaatttggctgcaaaatatgga
ggccaaatacccaaatcggattttctagcgcccgataagcaacagaatctgaaaaatctg
ctgaaggattactttaaatatttgtgcaaatatttgctcgctgaacaggcagaattgatg
aacatgacaaataatttgaagaaggccatggcatccaaaggtgaaatctctaccaaaacc
aaggagaagtgtgagctcatgcaggctaatttcgacaagcttttatcttcggctcaaaca
ctttcggatttgctagatgagcctttgcctgagttggccaaagaaattgaaatttgcaat
cctggggctgtcattgagaacatgatggatgaggcagctctgggagagcttgatccttgg
ggggacgaggaaaccaaaagtttctatgtagatttgcctgacttgcgacagtttctgccg
aatttctctgcgcccaaaattgatccagagcaaattgaggatacttcggtaatgactgaa
gaggctttagatgccgaaattgataatgacttagatttagatgatcctccctcaacggcc
tcagatcctgccaatgacaaagacgataaggatatcgatgaggtgactggagcaggcgca
ttgcctgataaaatcggcaatgcccttatggaagctggacgcatgagcaatcaatcggca
ggttcaattaaacaacagtttgctcaatttttgaaaaatcttaataactgtgtcaacaag
gagctcatcgactcggcggccatagaattcctacttaactataataccaagaataaccgc
aagaaactgactaaatccatatttgcggtgcatagaaatcgtttggatttattacccttc
ctctcgcgttttgtggccattgtcaatctttgcaatacggatgttgcccttgacctgtct
gaaaatttgcgcaaagaatttaaatggcatattcgcatgaaaaaccaattgaatattgaa
tcgaagataaaaattgtgcgttttatgggtgaaatggttaaatttggcctactcaagaaa
ttcgatgcccttagttgtttgaaaatattgttgcgcgactttcagcatcatcaaatagaa
atggcctgtgcgttcatagaagtagctggagtctatctctacaactgcaaggatacccgt
tggttgatgaataccttcctcgaccaaatgttgcgtctgaaaactgccaccgctttagac
tccagacatgctgcccaagtagagaatgtctactatttggttaaaccaccggaaacaata
aagcaagatgttgttttaagaccacccatacatgagtacatacggcatttggtattcgaa
gagttgaataaacaaaatgtggaacgttccattaaaatgctgaggcgcatcaattggaat
gatcccacagtcagcagttatgtcatcaaatgtttgtcaaaggcttatctcttgcgcttc
ccattaattcgctgcttggcagacttgctctctggtcttagctcatatcaggaaagagct
gtaaccatggtcattgataatgtttttgaagacataagggctggtctggaaattcattcg
cctaaattagcccaacgacgcattgccatggccaagtacttgggtgaactttacaactac
aagttggtggaatccaataacattttaaataccttgtactccattatctccttgggggtg
tctacggaagagggtgtggtttcgcctttggatccacctgatagtttgtttcgtttgaaa
ttggcctgtgttttgctggatacctgtggcccctacttcaccagttcaaccagcaaacaa
aaattggattactttctggttttcttccaaaactattactggtacaaaaaatccaatccc
atttttagcagggtacaagacacccatgacttgtttcccataattgttgatcacatgtac
cgcgaatgtttggccaatgtaaggccaaagctaaagctatacaagagtctggaacaagct
aaagaagccatagagaaactcaaggagaagttgtatcctcagcttaaggaaattaccgca
cagagttgcgaggagagcagtaatttgcaatcaatacccgaagatagtgaatttgatgat
ggagccagtgatgattcgtcctctgaaatggatcgtagaccccgcgatgaagtcgcggat
gatgaggatgccgccaatcaagccaacaccactgactggactgaaaacgaaggcatgcca
gaagatgaatgcattatggttcccaaaattcccgaaaagactaaagaagatttggaattt
gaacaaatgtttgaaaaaatggcccaagattcatatcaagaacgtttaaaggaaactgtt
aaacccaacaccaaggatataccagtacccatgatggtaagaaataacaaaaaatcctat
gaacaaattgcttccatgccaactacggctacctcgcaacaatcaacgacaactgctggt
gacacctccaaacctaattcctctgcagctgggggtgctggtgctgctactggagctgga
cccattaactttgtactcatggtacgcggtggcaaaggcggcaaacaacaatttaaacaa
tttgttgctccctccgattctcaattggccattaacttgaaattgcaagaggaaaaaata
cgcgaagaaaaggaaaaagttaaacgtcttacgcttaatattaccgaacgcattgaggag
gaggattaccaggaatccctaatgcaatcgcagcgcagcagccagaccaatctgtatgca
cgtcctagtaaacctaaatttaagcatcaaaaaggcgcccctgatgttgatttaattttc
cattga
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