Stomoxys calcitrans (stable fly): 106087503
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Entry
106087503 CDS
T07664
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03018
RNA degradation
scac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106087503
09123 Folding, sorting and degradation
03018 RNA degradation
106087503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106087503
03041 Spliceosome [BR:
scac03041
]
106087503
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106087503
mRNA degradation factors
5'-3' decay
Lsm complex
106087503
Spliceosome [BR:
scac03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106087503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
106087503
NCBI-ProteinID:
XP_013108011
UniProt:
A0A1I8PKW5
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Position
5:94347010..94347454
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AA seq
96 aa
AA seq
DB search
MASALEQYINHTVSIITADGRNFIGTLKGFDQTINVILDESHERVFSTSAGIEQIVLGLH
IIRGDNIAVIGQIDETIDSRLDFANIRGEPLGPVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgctttggaacaatacataaatcacacagtctcaataatcacagcagatggc
agaaacttcattggtacattgaagggtttcgatcagactataaatgtcattttggacgaa
tcccatgaacgtgttttctctacatcggccggcatcgagcaaatagttttgggtctacac
atcattagaggcgataatatagcagtaattggacaaatagacgaaaccatcgattcccgc
ctagactttgccaacatacgaggtgaacctttgggcccggtggtacattga
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