Stomoxys calcitrans (stable fly): 106088302
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Entry
106088302 CDS
T07664
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106088302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scac03021
]
106088302
03036 Chromosome and associated proteins [BR:
scac03036
]
106088302
Transcription machinery [BR:
scac03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106088302
Chromosome and associated proteins [BR:
scac03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106088302
PBAF complex
106088302
GBAF(ncBAF) complex
106088302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
106088302
NCBI-ProteinID:
XP_013109202
UniProt:
A0A1I8PRY1
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All DBs
Position
2:complement(221041717..221046344)
Genome browser
AA seq
1166 aa
AA seq
DB search
MCTLGPKKDGSPNIDFFNSAESLQGFETIRQWLQKNCKKYLAGSNEPITKESLSQLLVQF
LQYVEAKLGKNSPEPPATRIPMRFFLDFKPNGGLCVIFSTMFRFRAEQRGKKFDFSVGKN
PTRKDPNIQLLIDIEQALVEAELYRTPFIYIRPEVDKQLATRLREILATRRVEIVSDEEE
ATHIIYPEVDPHPDEYARPIFKRGNHVMMHWYYFPESYDTWTPNTLELPDSVLENPESPA
ERWRVSASWINDLEQYNEWMAEEDYEVDEMGKKKTHKLRLSIDDIMSGGVDEKKKSASAT
PAAAKQKRRRSPSPGSSSKSGKRKRSPAVLHKKSRNDEEDEDLTRDMDDPPAETNLQEVI
KTSSLQSTASPAPGNKSRGDNDMIPIKGGTLTDLDDEMTGGSGTQAMSACDGENSQTGKT
SDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKS
KTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDA
ELRPTPMGPPPTSHFHILSDTPSGIQSLNPQKTPQPSAAKTLLDLDKKPSGGAVSKEIKE
ESLDKAPPVGIKTEPIENGSSTGSGQFGLKLDQYAKKPAAMKNRTAASLSREWTDQETLL
LLEGLELHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSK
SGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASAGGKF
DPSYGLANSGIAGTGTDKEEEDPNTATAPGAVQATAPAASSDEEMKDVSKKDEKDPTKST
EDTSKDKDKKDDSENEKEKDKTENESDKKEDNGSGADVKPEDPSAERGSGDSSASKELDT
TKQVFNETNVQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEE
LETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGGTAPPN
AAAASTAGTTATGGNASSAVTPSLPGTPATAGSAANLTGAQSAAAPPSAVGTSATTAAAT
SAPVVAPTTTPMDTTPATVPPSSVPPATGVSEAASATSAPGQTLAATNPSSGAPIPPNVA
GGPPAATANIPPATVGPGPAGGVPPA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtgtactttgggtcccaagaaggacggaagtcctaatatagactttttcaattcagcc
gagtcgctacagggctttgaaacgataagacagtggctgcagaaaaattgtaaaaaatat
ttagctggtagtaatgagccaatcaccaaagaatcattgtcgcagttgctggtgcagttc
ttgcagtatgtggaagcaaagttgggcaaaaattcgccggaacctccagcgactcgtata
ccgatgcgtttctttttggatttcaagcccaatggtggcctctgcgttatattttccacc
atgtttcgttttcgtgccgaacaaaggggaaagaaatttgatttttctgtgggtaagaat
ccaacacgaaaggatcctaatattcaactgctgattgacatagaacaggctttggtagag
gcagaactctatcgtacccccttcatctacatacgccccgaagtcgataagcagttggcg
acacgtttaagggagattttggcaactcgccgtgtggaaattgtctcggatgaagaagaa
gctactcatataatatatcctgaagtagatccacatccggacgaatatgcccgccccata
tttaaacgcggcaaccatgttatgatgcattggtactattttcccgagtcctatgataca
tggacaccaaataccttagaactaccggatagcgtgctcgagaatcccgaatcgccagct
gaacgatggcgggtgtcggcatcatggattaacgatttggagcaatacaatgagtggatg
gccgaagaggactatgaagttgatgaaatgggtaaaaagaaaactcacaagctgcgtctg
tccatcgatgatataatgtcgggtggagtggacgagaagaagaaatcggctagtgctaca
ccggctgcagccaaacaaaagcgcagacgttccccttctcctggctcttcatcaaagtcg
ggaaaaagaaaacgttcacctgctgtgttgcataagaaatcacgaaatgacgaggaggac
gaagatttaacacgagacatggatgatcctccagccgaaacaaatctacaggaggtgatt
aagacatcatctttgcagtccacagccagtccggcgccgggaaataaatcaagaggggat
aatgacatgattccaataaaaggcggtacattgaccgacttggacgatgaaatgactggt
ggaagtggtacccaggctatgtctgcctgcgatggtgaaaattcccaaactggcaaaaca
agtgacaacagcaatacacaggagttttcatcttctgccaaagaagacatggaagacaat
gtcaccgagcaaacccatcacattattgtaccttcatattcggcatggtttgactacaac
tctatacatgtcatcgaaaaacgtgcaatgcccgagttcttcaactcgaaaaacaaatcc
aaaacccctgaaatatatatggcgtacagaaattttatgattgatacctatcgtctgaac
cccacagagtatttaaccagcactgcctgccgtcgcaatttggcaggtgatgtttgtgct
attatgcgagtgcatgcgtttcttgagcaatggggtttgattaattatcaaatcgatgca
gaattacgccccacaccaatgggtcctccccctacgtcgcatttccacatactttcggac
acaccctcgggtatacagtctttgaatcctcaaaaaactccacaaccatcggctgccaaa
accctcttggatttggataaaaaaccatccggcggagcagtaagcaaggaaataaaagaa
gaatccttggacaaggccccgcctgttggtataaaaacagagcccattgagaatggatcc
tcaactggttcaggtcaatttggtctgaagttggatcagtatgccaagaaaccggctgcc
atgaaaaatcgtaccgcagctagtttgtcacgcgaatggacagatcaagagactcttttg
ctactcgaaggtttggaattgcacaaagatgattggaacaaggtttgcgaacacgtgggt
acccgcacacaggatgaatgtatattacattttctgcgcttgcccattgaagatccgtat
ttggaggatgatggaggatttttgggtcctctcggatgccaacccataccctttagtaaa
tcaggcaatccaattatgtctactgtggcattcttagcctctgtcgttgacccacgggtg
gctgcagcagcagctaaagcagctatggaagaatttgctgcaataaaggatgaggttccg
gctacaataatggataatcatatgaaaaatgtagagaaggcttcagctggcggcaagttt
gatccatcatatggattggcgaatagtggaattgcaggcacgggaacagataaagaagag
gaggatccaaatacggccaccgcacctggagctgtgcaagcaacggccccagctgcttct
agcgatgaagaaatgaaagatgtttccaagaaagatgaaaaagatcccaccaagtccact
gaggatactagtaaagacaaagataaaaaagatgatagtgaaaatgaaaaagaaaaagac
aaaactgagaatgaaagcgataaaaaagaagataatggctctggtgccgatgttaaacct
gaagatccttcggcggagcgtggctccggcgacagctctgcctccaaagagttggataca
acaaaacaagtttttaacgaaacaaacgttcaaacagcagcagctgctgctctggcctcg
gcagccgtcaaggccaaacatttggcagctttagaagaacgcaaaataaagtctcttgtg
gcgcttttggtggagacccaaatgaagaaactcgaaattaaattgcggcattttgaggaa
ctggaaactactatggaacgtgaacgagagggtttggaataccaacgacaacagttaatc
acggagcgccaacaatttcatctggagcaattgaaagctgcagaatttagagctaggcaa
caggcacaccatcgtctgcaacaggaacaacagtggcaaggtggcactgcgccaccaaat
gcagcggcggcatcaaccgcaggtacaacagcgacaggtggtaatgcatctagtgctgtt
actccaagcttgcccggaacccctgcgactgctggttctgctgctaacctaactggagca
caatcggccgcagctccaccaagtgcggttgggacaagtgcaacaaccgctgccgctaca
tcagccccagttgttgctcctacaactacacccatggacacaacaccggcaaccgttcca
ccctcgtcagtaccccctgcaaccggtgtttcggaagccgcgagtgccacatcagccccg
ggccaaactcttgctgccacgaatccatcaagtggtgcacctatacctccaaacgtagct
ggaggtcctcctgcggccacagcaaacattcccccagcaacagtggggccaggacctgca
ggaggagtaccgcctgcttaa
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integrated database retrieval system
